Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | AFE_0105 |
Symbol | |
ID | 7137104 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
Kingdom | Bacteria |
Replicon accession | NC_011761 |
Strand | - |
Start bp | 96590 |
End bp | 97855 |
Gene Length | 1266 bp |
Protein Length | 421 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 643528520 |
Product | metal ion transporter, NRAMP family |
Protein accession | YP_002424616 |
Protein GI | 218665730 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1914] Mn2+ and Fe2+ transporters of the NRAMP family |
TIGRFAM ID | [TIGR01197] NRAMP (natural resistance-associated macrophage protein) metal ion transporters |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.746407 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCTGCTG CGCCCGCTGC CCGCAATATC CAATCCCTGG CCCATCGCTC GCGCTGGGGT ATCTTCCTCG CGGTACTGGG TCCCGGCCTG GTGGTCATGC TCGCCGATAC CGACGTCGGC AGCATCATCA CCGCCGCCCA GAGTGGCGCA CAATGGGGCT TCAAGCTGCT GCTCCTGCAA TTCGTCCTCA TGCCTATTCT CTACATCGTG CAGGAGCTGA CGGTCCGTCT CGGCATTTTT ACGGGTAAAG GACACGGTGA ACTGATTAGC GAAACCTTCG GGAAAGGCTG GGCCTATCTC TCCGTCGCCG GTCTCAGTAT CGCCACCACC GGCGCCTTGC TGACGGAATT TTCAGGAGTC GCGGGCGTCA GCCATCTCTA TGGCTTGCCG CGCTGGGTCG GGGTTGCCCT GGCCGCAGCC ACCCTGCTGA TCGTCGTCTG GACCGGTTCG TATCGACGCG TCGAACGCAT CGCCTTGATC ATGGGCCTCT TTGAGCTGGT CTTTTTTGGT ATCGCCTGGG CCAGTCATCC CAGCATCCAT GAAATCCTGG ATGGCCTGCT GCACGCCCCC ATCACCAACG ACCACTACAT GATGCTGGTC GCCGCCAATA TCGGTGCCGT CATCATGCCG TGGATGGTGT TCTACCAGCA GTCGGCAGTG GCTGATAAGG GTCTGCACCC CGAACATTAC CGCCATGCCC GTTGGGATAC CGCGTTCGGC GCGATCATTA CCCAGGCGAT CATGGCGGCG GTGCTGATCG CCACAGCCGC CACCATTGGC CGCCTCAACC CCAACGCACC CCTCAATACG GTGCATCAGC TCTCGGAGGC CATCATTCCC TATCTCGGCA ACACCTGGGG ACGGATTGTG TTTTCCCTGG GCATCCTTGG GGCAGGTATG GTGGCGGCCA TCGTCGCCTC CCTCGCCGGG GCCTGGGGTT GGGGGGAAGT CACCGGCTTT CGCCACTCCC TGGAGCATCA CCCCAAAGAT GCGCCCTGGT TTTACGGGAT CTACACCACC ATCATCGCGG CTGGCGCCGC GGCAGTGATC ACCATCCCCG ACCTCGTCAG CCTCGACATC GGGGTCGAAG TGATGAATGC GCTGCTCCTG CCCCTGGTGC TGGGCTTTCT GGTGGCCCTG TCCATCAAGG CGCTGCCCGC CGAACACCGC TTGCGCGGCC CCTATCTCTG GCTGGTGCTG TTCGTGGTGA TTCTGGCGGG GGGGTTGGGA GTTTACGGAG GATTGAACAG CATTCCGGGT TGGTAG
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Protein sequence | MSAAPAARNI QSLAHRSRWG IFLAVLGPGL VVMLADTDVG SIITAAQSGA QWGFKLLLLQ FVLMPILYIV QELTVRLGIF TGKGHGELIS ETFGKGWAYL SVAGLSIATT GALLTEFSGV AGVSHLYGLP RWVGVALAAA TLLIVVWTGS YRRVERIALI MGLFELVFFG IAWASHPSIH EILDGLLHAP ITNDHYMMLV AANIGAVIMP WMVFYQQSAV ADKGLHPEHY RHARWDTAFG AIITQAIMAA VLIATAATIG RLNPNAPLNT VHQLSEAIIP YLGNTWGRIV FSLGILGAGM VAAIVASLAG AWGWGEVTGF RHSLEHHPKD APWFYGIYTT IIAAGAAAVI TIPDLVSLDI GVEVMNALLL PLVLGFLVAL SIKALPAEHR LRGPYLWLVL FVVILAGGLG VYGGLNSIPG W
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