| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | AFE_0034 |
|---|
| Symbol | rnpA |
|---|
| ID | 7134333 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011761 |
|---|
| Strand | - |
|---|
| Start bp | 37798 |
|---|
| End bp | 38148 |
|---|
| Gene Length | 351 bp |
|---|
| Protein Length | 116 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 643528451 |
|---|
| Product | ribonuclease P protein component |
|---|
| Protein accession | YP_002424548 |
|---|
| Protein GI | 218667338 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0594] RNase P protein component |
|---|
| TIGRFAM ID | [TIGR00188] ribonuclease P protein component, eubacterial |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACCCGG CGCTGGCGCA TCCTCATCGT TTTACCCGCG AGGATCGTCT CCGCCAGAAG
GTGGCTATCC AGCGCACCCT CAAGCAGGGG CGCAAGAAGG TTTTTCCGGA ATTGGTGATC
TACGCCCTGC GTAATGAGCT GCCACATCCC AGGCTGGGTC TGGCGGTGAG TCGCAAGGTG
GGCAATGCCG TGGTCCGCAA CCGCATCAAG CGGCGCCTGC GCGAAGCCTT CCGGCAGCAG
TCGGTGCGCA CACGGGGGCG CGACGTGCTG GTCGTGGCGC GGCCGAGCGC CCGGCAACTC
AGCATGCGGG CCATGGGTGC CTACCTTCAG CAAACCCTGG AGAGAACATG A
|
|---|
| Protein sequence | MNPALAHPHR FTREDRLRQK VAIQRTLKQG RKKVFPELVI YALRNELPHP RLGLAVSRKV
GNAVVRNRIK RRLREAFRQQ SVRTRGRDVL VVARPSARQL SMRAMGAYLQ QTLERT
|
|---|
| |