Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | AFE_0019 |
Symbol | def-2 |
ID | 7134361 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
Kingdom | Bacteria |
Replicon accession | NC_011761 |
Strand | + |
Start bp | 20852 |
End bp | 21355 |
Gene Length | 504 bp |
Protein Length | 167 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 643528436 |
Product | polypeptide deformylase |
Protein accession | YP_002424533 |
Protein GI | 218667290 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0242] N-formylmethionyl-tRNA deformylase |
TIGRFAM ID | [TIGR00079] peptide deformylase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCCCCTTT TGAAGATACT GGAGATTCCT GACGCACGCC TCAAGGACGT GGCTCGACCC ATAGCCAGGG TGGACAAACA GATTCAGCAG CTTGCCGACG ATATGGCGGA GACCATGTAT GATGCCCCGG GTATCGGTCT CGCCGCGCCA CAGGTGGCCG CTGGCCACCG GCTGATTGTC GTGGATGTTT CGGAAAATCG CAACGATCTG CTGACCCTGC TGAATCCGGA AATCATCGCG CGCACCGGTG AGGAGGAGAT GAAGGAGGGT TGTCTGTCGG TGCCAGGGGT GCTGGAAACG GTGCGCCGCG CCGAAAAGGT GACGGTACGC GCCACCACGG TACAGGGCAA AACCGTTGAA TTGGAGGCCG ACGGTCTGCT GGCGGTTTGC CTGCAGCACG AGATCGACCA TCTCGACGGC ACGCTTTTTA TCGACCATCT GTCCCGCCTC AAGCAAAGTC TGATTCGCCG TAAGGCGGAA AAAAGGGTGC GGCTCGGTGA CTGA
|
Protein sequence | MPLLKILEIP DARLKDVARP IARVDKQIQQ LADDMAETMY DAPGIGLAAP QVAAGHRLIV VDVSENRNDL LTLLNPEIIA RTGEEEMKEG CLSVPGVLET VRRAEKVTVR ATTVQGKTVE LEADGLLAVC LQHEIDHLDG TLFIDHLSRL KQSLIRRKAE KRVRLGD
|
| |