Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | A9601_18281 |
Symbol | lysS |
ID | 4718565 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. AS9601 |
Kingdom | Bacteria |
Replicon accession | NC_008816 |
Strand | - |
Start bp | 1559871 |
End bp | 1561337 |
Gene Length | 1467 bp |
Protein Length | 488 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 640079561 |
Product | lysyl-tRNA synthetase |
Protein accession | YP_001010218 |
Protein GI | 123969360 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1190] Lysyl-tRNA synthetase (class II) |
TIGRFAM ID | [TIGR00499] lysyl-tRNA synthetase, eukaryotic and non-spirochete bacterial |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.505849 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAATAAAG GATTTGCTTC TTACGCACAA AGCTTTAAGG TATCACATAC TACCAGTTTT CTTATTCAAA AATTTGATCA TCTAGAAAAT GGTCAAGAGG AAGACTTCAG TGTTTCTATT GCTGGTAGAG TTCTGGCAAA AAGGGTAATG GGCAAAATTG CCTTTTTCAC AATAAGCGAT CAAGAAGGTC AGATTCAGCT TTATCTAGAT AAAAGGATTA TTAATTTCAA TTTAGAAAAA CAAAAATTAC TTTCTTTTGA AGATCTCAAA GAAATAGTAG ATATTGGTGA TTGGATAGGA GTCTATGGAA CTATTAAAAA AACTAATAAA GGTGAGCTTT CAATTAAAGT AGAAAAATGG GAAATGTTAT CCAAATCATT ACAACCTCTC CCAGATAAAT GGCATGGATT GACTGATATT GAAAAAAGAT ATAGACAACG TTATTTAGAT TTAATAGTTA ATCCTCACTC TAAAAATGTA TTTAAAACCA GAGCGAAATG TATAAGTTTT ATAAGAAAAT GGCTAGATAA TAGAAATTTT TTAGAGATAG AGACTCCAAT TCTGCAATCT GAAGCTGGTG GTGCTGAAGC AAGACCATTT ATAACTCATC ACAATACATT AGATATTCCG TTGTATTTAA GAATAGCTAC AGAATTACAT TTAAAGCGAA TGGTTGTTGG AGGTTTTGAG AAAGTCTATG AATTGGGAAG AATCTTCCGT AATGAGGGGA TAAGTACAAG GCATAATCCA GAATTCACCT CAGTGGAAAT TTATGAAGCT TATTCTGATT ATGTAGATAT GATGAATTTA ACTGAAGAAT TGATTAAAGA TATCGTAGCT GATGCATGTG GGTCCTTAAT TATAAATTAT CAAAATAAAG AAATTGATTT TTCTAAGCCT TGGTCAAGAA TATCCATGAA AGCTATTGTC AAAAAATATA CAGGGATTGA TTTTGATTCT TTCAGTGGAG ACTTTCTAGC AGCAAAACAA GCCGTTAAAA ATATCAATGT TGATTGTTCT AATAAAGTAA ATACTATGGG AAGACTTTTA AATGAGGTCT TCGAGCAAAA AGTAGAATCA AAACTTGTAG AACCCACTTT TGTTATTGAT TATCCTGTTG AAATTTCTCC TTTAGCTAGG CCTCATCATG ATAATAAACA AATAGTTCAG AGATTTGAAT TATTCATTGT TGGTAGAGAA CTGGCAAATG CGTTTAGTGA GTTGATAGAT CCAGTAGATC AAAGAGAAAG AATGCAATTA CAGCAATCTC TTAGAGACGA AGGAGATCTT GAGGCTCACT GTATAGATGA AGATTTTTTA AATGCTTTAG AGATTGGCAT GCCGCCTACG GGAGGATTAG GTATAGGCAT TGATAGGCTA ATTATGTTAA TTACTAATAG CGCATCGATT AGAGATGTAA TCCCTTTCCC ATTGTTAAAA CCAGAAATAA CTTCCAAAAA AAGTTAA
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Protein sequence | MNKGFASYAQ SFKVSHTTSF LIQKFDHLEN GQEEDFSVSI AGRVLAKRVM GKIAFFTISD QEGQIQLYLD KRIINFNLEK QKLLSFEDLK EIVDIGDWIG VYGTIKKTNK GELSIKVEKW EMLSKSLQPL PDKWHGLTDI EKRYRQRYLD LIVNPHSKNV FKTRAKCISF IRKWLDNRNF LEIETPILQS EAGGAEARPF ITHHNTLDIP LYLRIATELH LKRMVVGGFE KVYELGRIFR NEGISTRHNP EFTSVEIYEA YSDYVDMMNL TEELIKDIVA DACGSLIINY QNKEIDFSKP WSRISMKAIV KKYTGIDFDS FSGDFLAAKQ AVKNINVDCS NKVNTMGRLL NEVFEQKVES KLVEPTFVID YPVEISPLAR PHHDNKQIVQ RFELFIVGRE LANAFSELID PVDQRERMQL QQSLRDEGDL EAHCIDEDFL NALEIGMPPT GGLGIGIDRL IMLITNSASI RDVIPFPLLK PEITSKKS
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