Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | A9601_17581 |
Symbol | rplP |
ID | 4718490 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. AS9601 |
Kingdom | Bacteria |
Replicon accession | NC_008816 |
Strand | - |
Start bp | 1494123 |
End bp | 1494605 |
Gene Length | 483 bp |
Protein Length | 160 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 640079486 |
Product | 50S ribosomal protein L16 |
Protein accession | YP_001010148 |
Protein GI | 123969290 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0197] Ribosomal protein L16/L10E |
TIGRFAM ID | [TIGR01164] ribosomal protein L16, bacterial/organelle |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCTTAGTC CAAAACGTAC TAAATTCCGT AAACAACATA GAGGCAGAAT GAGGGGTGTA GCCTCAAAAG GAAATACTAT TGCATTCGGT CAATTTGCTC TCCAAGCTCA AGACTGTGGC TGGGTAACTG CACGTCAGAT TGAAGCAAGC AGAAGAGCTA TGACTAGATA TATCAAACGT GGTGGTCAAA TCTGGATAAG AATATTTCCT GATAAACCCG TAACCATGAG ACCTGCCGAA ACCAGAATGG GTTCTGGTAA AGGTAATCCA GAGTTTTGGG TCGCAGTTGT AAAACCTGGA AGAATACTTT TTGAAATGGG TGGTGAGGAT ATCACTGAGG AAACTGCAAA GGAAGCTATG CGTCTGGCTC AATATAAACT TCCTGTAAAA ACTAAATTTA TCTCAATTGA TAAAAATCTA GAAAATTCCT CCCAAGAAAA TACAAAAGAT AGTAAAAAAT CTCAAGAGGA GGTTAAACAA TGA
|
Protein sequence | MLSPKRTKFR KQHRGRMRGV ASKGNTIAFG QFALQAQDCG WVTARQIEAS RRAMTRYIKR GGQIWIRIFP DKPVTMRPAE TRMGSGKGNP EFWVAVVKPG RILFEMGGED ITEETAKEAM RLAQYKLPVK TKFISIDKNL ENSSQENTKD SKKSQEEVKQ
|
| |