Gene A9601_17511 details

Gene Information

• Locus tag: A9601_17511
• Symbol: rplF
• ID: 4718483
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Prochlorococcus marinus str. AS9601
• Kingdom: Bacteria
• Replicon accession: NC_008816
• Strand: -
• Start bp: 1491336
• End bp: 1491875
• Gene Length: 540 bp
• Protein Length: 179 aa
• Translation table: 11
• GC content: 36%
• IMG OID: 640079479
• Product: 50S ribosomal protein L6
• Protein accession: YP_001010141
• Protein GI: 123969283
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0097] Ribosomal protein L6P/L9E
• TIGRFAM ID: [TIGR03654] ribosomal protein L6, bacterial type

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCAAGAA TCGGAAAAAC ACCAGTACTT ATTCCAGAGA AAGTTACAGT TGATTTTGAT 
GGATTAACAG TTACAGTTAA GGGCCCAAAG GGTGAGTTAA AACGTCTCAT GCCTGAGGGT 
GTTAGTTTTG ATAAAAAAGA TAATACTGTT GTCGTAAGTC CTACCACAAC CAAAATACAT 
TCAAGGCAGA GACATGGTTT ATGTAGGGCT TTAATTGCAA ATATGGTTGA AGGGGTTACT 
CAAGGTTTTT CAAAGAAACT AGAAATTGTT GGCGTTGGAT CAAGAGCACA AGTCAAAGGA 
AAAAATTTAG TTGTTAGTGC AGGATATAGT CATCCTGTAG AAATGATCCC CCCTGATGGT 
ATAACATACA AAGTTGAGAG TAATACAAAC GTTACCGTAT CTGGAATTGA TAAGGAAATT 
GTTGGCAATG AAGCAGCAAA AATCAGATCA ATTAGACCTC CAGAGCCATA CAAAGGTAAA 
GGAATTAAAT ATCATGATGA GAGAATTCTC AGAAAAGCTG GTAAATCTGG CAAAAAATAA 

 

Protein sequence

MSRIGKTPVL IPEKVTVDFD GLTVTVKGPK GELKRLMPEG VSFDKKDNTV VVSPTTTKIH 
SRQRHGLCRA LIANMVEGVT QGFSKKLEIV GVGSRAQVKG KNLVVSAGYS HPVEMIPPDG 
ITYKVESNTN VTVSGIDKEI VGNEAAKIRS IRPPEPYKGK GIKYHDERIL RKAGKSGKK