Gene A9601_16981 details

Gene Information

• Locus tag: A9601_16981
• Symbol: infB
• ID: 4718428
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Prochlorococcus marinus str. AS9601
• Kingdom: Bacteria
• Replicon accession: NC_008816
• Strand: +
• Start bp: 1440518
• End bp: 1443898
• Gene Length: 3381 bp
• Protein Length: 1126 aa
• Translation table: 11
• GC content: 36%
• IMG OID: 640079424
• Product: translation initiation factor IF-2
• Protein accession: YP_001010088
• Protein GI: 123969230
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0532] Translation initiation factor 2 (IF-2; GTPase)
• TIGRFAM ID: [TIGR00231] small GTP-binding protein domain; [TIGR00487] translation initiation factor IF-2

Plasmid Coverage information

• Num covering plasmid clones: 1
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACTATCA GCGATAAAAT CAGAATTTAC GAACTTTCCA GAGACTTAAA TCTGGAAAAT 
AAAGATATAC TTGATGCCGC TCAAAAACTT TCAATTTCAG TAAAAAGCCA TAGCAGCTCT 
ATTAGTTCAG AAGAGGCAAA AAAAATTAAA AATCTTATTA ATAAAAAGAA TCCAGATAAA 
ACAATACTTT CCATTAATAA ACCTTCAATT AAAAAAGATA ACTTCAAACA AAACAAAGAA 
GATAAATCTC CTGTTCTCTC TTCTAAACAA GGGAAACCTC TCAAAAATAA TTCGAACAAA 
AAGCCATTAT TGATAAAACC ACTTAACAAG CCTGAGAGTG TAAAAAAAAT TTCAAATCAA 
CTTCAAAATC CCAATAAACC TAATATTGTT AACAGTTCAC AATCTCGAGC AAATCTTACA 
AATACAAATA GTAAACCTTC ACAGAATTTC AACCAAGATA AAAAAACTTT CGTAAATAAC 
ACACCCCCAC CTATCAAAAG TCCGGCAAAA CCACCTATTC AACTAATTGC AAAGCCTAAA 
AATATAAATA ATAATGTTAA ATCTAGTGAA TCTTCCCAGA ACATCGCCAG GGCAGAAGAT 
AAAAGACGAC TATCAAGCAA ACCTGATCAA AATACGAACA AACCTAAAAC AAAAAATTTT 
AATAATAGAA AGAACACTCC TGAGCTCGTA GGAGCTCCAA TAAGAAGAGA AGATCCAATA 
ATAAATCCTA ATAAGCAAAA CAATAATAAG CAAAACATTG CTTTTAAACA AACTGCCTCT 
AACAGACCTG GTTCTCCCAA CAGACCTGGC ATGCCCAATA GGCCTGGTTT AAGAAACAAA 
CCTTCAGATC AAGGCAGACC TGGCTCATTT AATAGGCAAG GCAATCCCAA TAGACCTGGT 
TCTCCCAACA GACCTGGCAT GCCCAATAGG CCTGGTTTAA GAAACAAACC TTCAGATCAA 
GGCAGACCTG GCTCATTTAA TAGGCAAGGC AATCCTAATA GACCTGGTTC TCCCAACGGA 
CCTGGCATGC CTAATAATAG GCCTGGTTCT AAATTCAATG GCCAAAATTC CTCTGGGATT 
AGGAAGCCAG TATCACCTAA TGAACTTTTA CAACTTCAAA AAAATAATAA CTCTGAGAAA 
GACAAAATAG GTATAAAGAA TAACTCAAAA CAAAATATCG AGGTACCTAA GCAGAAAGCT 
AAAGCGCCTA ATAATCGTCC AAATGCTACT CCAAGTTCCA AAAAACCTCC TCATAGAACA 
TTTTCTAATA GTTCAAAGAA ACCTGGAAAG ACAGACTGGG ATGATAGCGC AAAACTTGAA 
GCACTAAGAA GCAAAAATAC CCAAAAACAA AGACAGAAAG TTCATATTAT TGGTGAAAAT 
GATGATTCAT TAACGTCTGA AACTAGTGGA TATTCAGGCG AAAAAATTTC AATCTTATCA 
GCAAGTTTGG CACGTCCAAA GAAAGGAAAG TCTGATGAAT CCAAATCTCA AAAAACAATA 
AAACAATTTA AAAAGAAGAA AAAAGAGACT ACTAGGCAAA GACAGAAAAG AAGAGCTATG 
GAGTTAAAGG CTGCCAAAGA AGCCAAACAA GTACGACCTG AAATGATAAT CGTGCCCGAA 
GATAATTTAA CAGTCCAAGA ATTAGCGGAT AAATTAAGTC TTGAAAGTTC TGAAATAATC 
AAATCTCTTT TTTTTAAAGG AATAACTGCA ACTGTTACTC AATCACTCGA CTTAGCAACT 
ATTGAAACAG TAGCAGAAGA ATTTGGGGTA CCTGTTTTGC AAGATGATAT TCAAGAAGCC 
GCTGAGAAAA CAGTTGACAT GATTGAATCT GAAGATATTG ATAATCTTAT AAGAAGACCA 
CCTGTTATTA CAGTGATGGG TCATGTAGAC CATGGTAAAA CAAGTCTTCT AGATTCCATC 
AGAGAATCAA GAATAGCTTC AGGAGAAGCA GGGGGTATCA CTCAACACAT AGGAGCTTAT 
CAAGTTGAAT TTGAACATGA ATCTCAAAAG AAAAAATTAA CATTTCTTGA TACCCCAGGT 
CATGAAGCCT TTACTGCAAT GAGAGCAAGG GGTACAAAGG TTACTGATGT AGCTGTTCTT 
GTAGTTGCTG CAGATGATGG TTGCAGACCT CAAACTTTAG AAGCTATTAG TCATGCAAGA 
GCTGCAAAAG TACCAATTGT TGTTGCAATT AATAAAATTG ATAAAGAGGG AGCATCTCCA 
GAAAGAGTAA AGCAGGAACT ATCAGAAAAA GATTTAATTG CTGAAGATTG GGGAGGAGAT 
ACAGTGATGG TTCCAGTAAG TGCTATCAAA AAACAAAACA TTGATAAATT ACTCGAAATG 
ATTTTATTAG TTTCAGATGT TGAAGATCTA CAAGCTAACC CTGATAGATT TGCAAAAGGT 
ACTGTTATTG AAGCCCACCT AGACAAAGCC AAAGGGCCAG TAGCTACTTT ATTAGTACAA 
AATGGAACCT TGAAATCTGG AGATGTTTTA GCTGCGGGTT CAGTCCTTGG AAAAATTAGA 
GCAATGGTTG ATGAACATGG TAATAGAATT AAAGAAGCAG GACCATCATT CCCAGTGGAA 
GCGCTAGGAT TCAGTGAAGT ACCTACTGCA GGAGATGAAT TCGAAGTCTA CCCTGATGAG 
AAAACTGCTC GAGCCATTGT CGGAGAAAGG GCAACAGATG CTAGAGCCAC AAAATTAGCT 
CAGCAAATGG CCTCAAGAAG AGTCAGCTTA TCATCCTTAT CAACTCAAGC AAATGATGGG 
GAACTTAAGG AGTTAAACTT AATTCTAAAA GCTGATGTTC AAGGTAGTGT TGAAGCGATA 
TTAGGATCAC TAGAACAATT ACCAAAAAAT GAAGTTCAAG TCAGAGTCCT ACTCTCTGCT 
CCTGGAGAAA TAACTGAGAC AGATATAGAT CTTGCTGCTG CATCTGGGTC AGTAATTGTT 
GGGTTTAACA CCTCATTAGC TTCTGGCGCG AAAAGAGCAG CTGATGCTAA TGACGTTGAC 
ATAAGAGAAT ATGAAGTTAT CTATAAACTC TTAGAAGATA TTCAGTTGGC CATGGAAGGG 
CTACTTGAAC CCGATCTTGT CGAAGAATCA TTAGGGCAAG CTGAAGTTAG AGCAACTTTC 
TCAGTCGGTA AAGGAGCTAT TGCAGGCTGT TACATACAAA CTGGAAAATT ACAAAGGAAT 
TGTTCGCTAA GAGTTATTAG ATCAGAAAAA GTAATATTTG AGGGTAATTT AGACTCTCTA 
AAAAGAGTTA AAGATGATGT AAAAGAAGTA AATACAGGAT TTGAATGTGG AGTTGGCTGC 
GATAAATTCT CTTCATGGGT CGAAGGAGAT GTAATCGAAG CATTCAAATT TGTCACCAAA 
AAGAGGACCT TATCACAATA A 

 

Protein sequence

MTISDKIRIY ELSRDLNLEN KDILDAAQKL SISVKSHSSS ISSEEAKKIK NLINKKNPDK 
TILSINKPSI KKDNFKQNKE DKSPVLSSKQ GKPLKNNSNK KPLLIKPLNK PESVKKISNQ 
LQNPNKPNIV NSSQSRANLT NTNSKPSQNF NQDKKTFVNN TPPPIKSPAK PPIQLIAKPK 
NINNNVKSSE SSQNIARAED KRRLSSKPDQ NTNKPKTKNF NNRKNTPELV GAPIRREDPI 
INPNKQNNNK QNIAFKQTAS NRPGSPNRPG MPNRPGLRNK PSDQGRPGSF NRQGNPNRPG 
SPNRPGMPNR PGLRNKPSDQ GRPGSFNRQG NPNRPGSPNG PGMPNNRPGS KFNGQNSSGI 
RKPVSPNELL QLQKNNNSEK DKIGIKNNSK QNIEVPKQKA KAPNNRPNAT PSSKKPPHRT 
FSNSSKKPGK TDWDDSAKLE ALRSKNTQKQ RQKVHIIGEN DDSLTSETSG YSGEKISILS 
ASLARPKKGK SDESKSQKTI KQFKKKKKET TRQRQKRRAM ELKAAKEAKQ VRPEMIIVPE 
DNLTVQELAD KLSLESSEII KSLFFKGITA TVTQSLDLAT IETVAEEFGV PVLQDDIQEA 
AEKTVDMIES EDIDNLIRRP PVITVMGHVD HGKTSLLDSI RESRIASGEA GGITQHIGAY 
QVEFEHESQK KKLTFLDTPG HEAFTAMRAR GTKVTDVAVL VVAADDGCRP QTLEAISHAR 
AAKVPIVVAI NKIDKEGASP ERVKQELSEK DLIAEDWGGD TVMVPVSAIK KQNIDKLLEM 
ILLVSDVEDL QANPDRFAKG TVIEAHLDKA KGPVATLLVQ NGTLKSGDVL AAGSVLGKIR 
AMVDEHGNRI KEAGPSFPVE ALGFSEVPTA GDEFEVYPDE KTARAIVGER ATDARATKLA 
QQMASRRVSL SSLSTQANDG ELKELNLILK ADVQGSVEAI LGSLEQLPKN EVQVRVLLSA 
PGEITETDID LAAASGSVIV GFNTSLASGA KRAADANDVD IREYEVIYKL LEDIQLAMEG 
LLEPDLVEES LGQAEVRATF SVGKGAIAGC YIQTGKLQRN CSLRVIRSEK VIFEGNLDSL 
KRVKDDVKEV NTGFECGVGC DKFSSWVEGD VIEAFKFVTK KRTLSQ