| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | A9601_11981 |
|---|
| Symbol | uppS |
|---|
| ID | 4717912 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prochlorococcus marinus str. AS9601 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008816 |
|---|
| Strand | + |
|---|
| Start bp | 1015117 |
|---|
| End bp | 1015920 |
|---|
| Gene Length | 804 bp |
|---|
| Protein Length | 267 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 30% |
|---|
| IMG OID | 640078914 |
|---|
| Product | undecaprenyl pyrophosphate synthase |
|---|
| Protein accession | YP_001009589 |
|---|
| Protein GI | 123968731 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0020] Undecaprenyl pyrophosphate synthase |
|---|
| TIGRFAM ID | [TIGR00055] undecaprenyl diphosphate synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTTTAG GAAAAATAAT TGACGCGAAA AATAATAACT TATCCATGAA AATAGATAAG
CAAAAAGTTC CAGAACATGT TGCAATAATA ATGGACGGCA ATGGTAGATG GGCAACAAAA
AAAGGGTTCC CTCGCACATA TGGGCATAAA AAAGGCGTTA GTGTTTTAAA GGAGATTCTC
AAAGCATCAA AAAAATTAGG ATGTAAAGTA CTAACTGTTT ACGCTTTTTC AACAGAGAAT
TGGACAAGAC CAACAAAAGA AGTTGACTTC CTCATTAATC TTTTTATCGA AGTTTTGAGA
AATGAAATTA GAGAGATACA TGAAGAATCA ACAAAAATAA AATTCATTGG AGATATAACC
CCTTTCCCAG AAAATCTAAA AAAAATAATA TCTAATTCAG AATCTCTAAC TAAAAACAAC
AATAAATTTT TATTGAATGT TTGTGTTAAC TACGGTGGTA GACAAGAAAT AGTAAAAGTT
GCAAAAGAAT TAGCATTAAA ATCTTCTTCT GGCGAAATAA AACCAAGTGA GGTTAATGAA
GAATTATTTA ATTCAGAGCT ATTAACTCGA GGAATTAAAG ATCCAGAATT ACTAATAAGA
ACCAGTGGAG AAAAAAGGAT AAGTAATTTT CTTTTATGGC AATTAGCTTA TTCAGAAATT
TATATATCTG ACGTAATGTG GCCTGACTTC AATGAGTTTG AATTTCTAAA AGCAATCATT
GATTACCAAT CGAGGAATAG ACGTTTCGGA GGTATAGAAT CATTACCAAA TGAATCTTTT
GAAGATTCTC ATTATACTCT CTAA
|
|---|
| Protein sequence | MSLGKIIDAK NNNLSMKIDK QKVPEHVAII MDGNGRWATK KGFPRTYGHK KGVSVLKEIL
KASKKLGCKV LTVYAFSTEN WTRPTKEVDF LINLFIEVLR NEIREIHEES TKIKFIGDIT
PFPENLKKII SNSESLTKNN NKFLLNVCVN YGGRQEIVKV AKELALKSSS GEIKPSEVNE
ELFNSELLTR GIKDPELLIR TSGEKRISNF LLWQLAYSEI YISDVMWPDF NEFEFLKAII
DYQSRNRRFG GIESLPNESF EDSHYTL
|
|---|
| |