Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | A9601_11941 |
Symbol | clpC |
ID | 4717908 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. AS9601 |
Kingdom | Bacteria |
Replicon accession | NC_008816 |
Strand | - |
Start bp | 1009566 |
End bp | 1012094 |
Gene Length | 2529 bp |
Protein Length | 842 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 640078910 |
Product | ClpC |
Protein accession | YP_001009585 |
Protein GI | 123968727 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0542] ATPases with chaperone activity, ATP-binding subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.316562 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTTGAAA GATTTACTGA AAAAGCTATA AAAGTCATTA TGCTTGCTCA AGAGGAAGCT AGAAGACTTG GTCATAATTT CGTTGGAACT GAACAAATTC TTTTGGGATT AATTGGAGAA GGAACTGGGG TTGCAGCGAA AGTACTTAAA TCACTTGGAG TCAATTTAAA AGATTCAAGG ATAGAAGTAG AGAAGATAAT AGGGAGAGGG TCAGGATTTG TAGCTGTAGA AATACCTTTT ACCCCTAGGG CTAAGAGAGT TTTAGAATTA TCTCTCGAAG AGGCTCGCCA ACTAGGTCAC AATTACATAG GAACAGAACA TTTATTATTA GGTTTAATAA GAGAAGGCGA GGGAGTAGCT GCAAGAGTTT TGGAAAATCT TAATATTGAC CTTACCAAAG TAAGAACTCA AGTCATCAGG ATGCTAGGCG AAACAGCCGA AGTTGGTTCA GGAACTAGTA CAACTAAGAG TAACCAGAAA ACTGCTACTC TTGATGAATT TGGTACAAAC CTAACAAAAC TAGCTAGTGA ATCAAAATTA GATCCTGTCG TTGGCCGTTA TTCAGAAATA GATCGTGTCG TTCAAATATT AGGTAGGAGG ACCAAAAATA ATCCTGTTCT TATAGGGGAG CCAGGTGTAG GTAAAACAGC TATCGCAGAA GGTTTAGCTC AAAGAATACA AACAGGCGAT ATTCCAGACA TTCTTGAAGA CAAAAGAGTT TTGACACTTG ATATAGGATT ATTAGTCGCA GGAACAAAAT ATAGAGGTGA ATTTGAAGAA AGGTTAAAAA AAATAATGGA AGAAATTAAA TCAGCAGGTA ATGTCATACT CGTCATTGAT GAGGTGCATA CTTTAATTGG TGCTGGAGCT GCTGAAGGAG CTATAGACGC AGCAAATATT CTGAAGCCAG CACTAGCTAG AGGAGAACTT CAATGTATTG GAGCAACAAC TCTCGATGAA TATAGAAAAC ATATCGAAAG AGACGCCGCT CTGGAAAGAC GATTCCAGCC TGTAATGGTA GGGGAGCCAT CTATTGAAGA TACAATAGAG ATATTAAAAG GCCTCAGAGA GCGTTACGAG CAACATCATC GTCTAAAAAT TACTGATGAT GCGCTAGAAG CAGCAGCTCA TTTAGGGGAT CGTTACATAT CTGATAGGTA TTTACCTGAT AAGGCTATAG ACCTCATCGA CGAGGCTGGA AGTAGAGTTC GTCTAATAAA TTCTAAACTC CCGCCTGAAG CAAAACAAAT AGATAAAGAA CTAAGACAAG TTCAAAAACA GAAGGAAGAA TCTGTAAGAG ATCAAAATTT TGATCAAGCT GGCCAATTAC GTGAAAAAGA GATTGAATTG TCTGCAAAAA TTAAAGAGGT ATTGGAAAAT AAAAAAGAAT CTGCAGAGGA AGATCAATTT AATGATGATA ATAAGTCTGT TGAAAGTGAT TCAAAACTCT ATCAAAGTCC CCTTGTTAGT GAAGAGGATG TAGCACATAT TGTAGCTTCA TGGACAGGCG TTCCTGTTCA AAAATTAACA GAAACCGAAT CAGTAAAACT TCTTAATATG GAGGAAACAC TTCACCAAAG GTTAATTGGA CAGGATGAAG CTGTAAAGGC TGTTTCTAGA GCTATAAGAA GAGCAAGAGT TGGTCTAAAA AATCCTAATA GACCCATTGC AAGTTTTATC TTTTCTGGCC CTACTGGTGT AGGTAAAACT GAATTAACTA AATCATTAGC TTCATATTTC TTCGGTAGTG AAGAAGCAAT GATTAGGTTA GATATGTCAG AATTTATGGA AAGACATACA GTTAGTAAAC TTATAGGTTC GCCTCCTGGA TATGTTGGTT TTAATGAAGG AGGTCAGCTT ACTGAGGCAG TTAGAAGACG TCCTTATACA GTTGTTTTAT TTGATGAAGT TGAAAAGGCG CATCCAGATG TATTCAATTT ATTATTGCAA CTACTTGAAG ATGGAAGATT AACTGACTCT AAGGGTAGAA CCGTAGATTT TAAAAATACT TTGTTAATAA TGACTTCTAA TATCGGTTCT AAAGTAATTG AGAAAGGGGG GGGCGGACTC GGATTTGAAT TCTCAGGAGA TTCAGTTGAA GATAGCCAAT ACAATAGAAT AAAATCTTTA GTTAATGAAG AACTTAAGCA ATACTTTAGG CCTGAATTTT TAAATAGACT TGATGAAATA ATTGTATTCA GACAACTAAC TAAAAATGAA GTTAAACACA TTGCTGAAAT AATGTTGCAA GAAGTTTTTG CACGACTACA AGATAAAGGC ATTAAGTTAG ATGTAACCGA TGCTTTTAAA GAAAGACTTG TTGAAGAAGG TTATAATCCT TCCTACGGTG CGAGACCTTT GAGAAGGGCA GTCATGCGTT TACTTGAAGA TAGTTTGGCT GAAGAAGTTC TTTCTGGGAG GATAAAAGAT GGAGATAAGG CTTTAGTTGA TATAGATGAT AATAAAAAAG TTATAATAAA CATATCTTCT GAAGAATCTT CTCAAGAACT AGCAAGTGCT AACTTCTAA
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Protein sequence | MFERFTEKAI KVIMLAQEEA RRLGHNFVGT EQILLGLIGE GTGVAAKVLK SLGVNLKDSR IEVEKIIGRG SGFVAVEIPF TPRAKRVLEL SLEEARQLGH NYIGTEHLLL GLIREGEGVA ARVLENLNID LTKVRTQVIR MLGETAEVGS GTSTTKSNQK TATLDEFGTN LTKLASESKL DPVVGRYSEI DRVVQILGRR TKNNPVLIGE PGVGKTAIAE GLAQRIQTGD IPDILEDKRV LTLDIGLLVA GTKYRGEFEE RLKKIMEEIK SAGNVILVID EVHTLIGAGA AEGAIDAANI LKPALARGEL QCIGATTLDE YRKHIERDAA LERRFQPVMV GEPSIEDTIE ILKGLRERYE QHHRLKITDD ALEAAAHLGD RYISDRYLPD KAIDLIDEAG SRVRLINSKL PPEAKQIDKE LRQVQKQKEE SVRDQNFDQA GQLREKEIEL SAKIKEVLEN KKESAEEDQF NDDNKSVESD SKLYQSPLVS EEDVAHIVAS WTGVPVQKLT ETESVKLLNM EETLHQRLIG QDEAVKAVSR AIRRARVGLK NPNRPIASFI FSGPTGVGKT ELTKSLASYF FGSEEAMIRL DMSEFMERHT VSKLIGSPPG YVGFNEGGQL TEAVRRRPYT VVLFDEVEKA HPDVFNLLLQ LLEDGRLTDS KGRTVDFKNT LLIMTSNIGS KVIEKGGGGL GFEFSGDSVE DSQYNRIKSL VNEELKQYFR PEFLNRLDEI IVFRQLTKNE VKHIAEIMLQ EVFARLQDKG IKLDVTDAFK ERLVEEGYNP SYGARPLRRA VMRLLEDSLA EEVLSGRIKD GDKALVDIDD NKKVIINISS EESSQELASA NF
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