Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | A9601_08241 |
Symbol | typA |
ID | 4717529 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. AS9601 |
Kingdom | Bacteria |
Replicon accession | NC_008816 |
Strand | + |
Start bp | 712982 |
End bp | 714778 |
Gene Length | 1797 bp |
Protein Length | 598 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 640078536 |
Product | tyrosine binding protein |
Protein accession | YP_001009215 |
Protein GI | 123968357 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG1217] Predicted membrane GTPase involved in stress response |
TIGRFAM ID | [TIGR00231] small GTP-binding protein domain [TIGR01394] GTP-binding protein TypA/BipA |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCATCTT CGATAAAAGA AATTAGAAAT GTTGCAATTA TTGCTCACGT AGATCATGGG AAGACAACGC TTGTAGATGC ATTGTTATCT CAATCAGGAA TATTTAGAGA CAATGAAGTT ATACCTACAT GTGTAATGGA TTCAAATGAT CTTGAGAGAG AAAGGGGGAT AACAATACTC TCAAAAAATA CTGCAGTTAA CTACAAAGAC ACCAGAATTA ATATTATAGA TACACCTGGA CATGCTGATT TTGGAGGAGA AGTTGAAAGG GTTTTGGGAA TGGTGGATGG TTGTCTGCTT ATTGTTGATG CAAATGAGGG ACCTATGCCT CAAACAAGAT TTGTTTTAAA AAAAGCATTA GAAAAAGGAC TTAGACCTAT CGTCTTTGTA AATAAAATTG ATAGACCACG AGTAGTACCA GAAATAGCAA TTGATAAGGT CCTTGATTTG TTTTTGGAGT TAGGAGCTGA TGATGATCAA TGTGATTTCC CTTATCTTTT TGGGAGTGGA TTATCTGGTT TTGCAAAAGA AGAGATGGAA TCTAATAGTG ACAATATGAT GCCTCTTTTT GAAGCTATTA TCAGACACGT TCCTCCTCCA GTAGGTGACT CTAATAAGCC TCTTCAGCTA CAAATAACTA CTTTGGACTA TTCTGATTTC TTAGGCAGAA TAGTAATCGG AAAGATCCAC AACGGGACTA TAAAAAATGG CCAACAGGCT AGTTTAATAA AGGAAAACGG AAAAACTATT AAAGGTAAGG TTAGTAAACT TTTAGGATTT GAAGGATTAC AAAGAATTGA TATAAATGAA GCATTTGCAG GTGATATTGT TGCTGTTTCT GGTTTCGATG ACGTCAATAT TGGTGAGACC ATAGCATGTC CCGACTCTCC TCATCCTCTT CCATTAATCA AAGTAGATGA ACCTACCTTA AATATGACTT TTGTTGTAAA TGATTCACCA TTTGCGGGTA AGGAAGGGAA ATTTGTTACT AGTAGACAAT TAAAAAATAG ATTGGAGAGG GAACTTTTAA CAAATGTTGC CTTGAGAGTG GAAGAAACTG ATTCTCCCGA TAAGTTCTCA GTTTCAGGAA GAGGAGAATT ACATTTAGGT ATTTTGATTG AAACCATGAG AAGAGAAGGG TTCGAGTTTC AAATCTCACA ACCTCAAGTA ATTTTTAGAG AAATTGATAA TGTTGAATGT GAGCCTATAG AGACTTTGGT CCTTGATGTG CCTGAAGTAT CCGTTGGTTC TTGTATAGAA AAACTTGGAT CGAGAAAGGC AGAGATGAAA AATATGCAGA CAAGTTCAGA TGGGAGAACC CAATTAGAGT TCCTTGTGCC ATCAAGGGGA CTAATTGGAT TTCGTGGAGA ATTTGTCCGG ATAACAAGAG GTGAAGGTAT CATGAGTCAT TCGTTTTATG AATACAAACC TAAAACAGGA GATTTTGAAA CTAGAAGAAA TGGAGTCCTT ATAGCTTTTG AGGAAGGTGT GGCCACGTTC TATGCATTAA AGAATGCTGA AGATAGGGGA GTCTATTTCA TTAAACCTGG AGTTAAAGTT TATAAGGGAA TGATAATTGG AGAGAATAAT CGACCTCAAG ATCTTGAGTT AAATATATGT AAAACTAAGC AGTTGACTAA TATGAGGTCT GCAGGGGCAG AAGAACTTGA TACTTTGCAG TCACCTGTTG ACATTACCCT TGAAAGAGCA CTCGAATATA TTGGTCCAGA TGAAATGCTT GAGGTAACAC CAGATTCAAT AAGAATGAGA AAAATAAATA AAAAGAAAAG AAATTAA
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Protein sequence | MSSSIKEIRN VAIIAHVDHG KTTLVDALLS QSGIFRDNEV IPTCVMDSND LERERGITIL SKNTAVNYKD TRINIIDTPG HADFGGEVER VLGMVDGCLL IVDANEGPMP QTRFVLKKAL EKGLRPIVFV NKIDRPRVVP EIAIDKVLDL FLELGADDDQ CDFPYLFGSG LSGFAKEEME SNSDNMMPLF EAIIRHVPPP VGDSNKPLQL QITTLDYSDF LGRIVIGKIH NGTIKNGQQA SLIKENGKTI KGKVSKLLGF EGLQRIDINE AFAGDIVAVS GFDDVNIGET IACPDSPHPL PLIKVDEPTL NMTFVVNDSP FAGKEGKFVT SRQLKNRLER ELLTNVALRV EETDSPDKFS VSGRGELHLG ILIETMRREG FEFQISQPQV IFREIDNVEC EPIETLVLDV PEVSVGSCIE KLGSRKAEMK NMQTSSDGRT QLEFLVPSRG LIGFRGEFVR ITRGEGIMSH SFYEYKPKTG DFETRRNGVL IAFEEGVATF YALKNAEDRG VYFIKPGVKV YKGMIIGENN RPQDLELNIC KTKQLTNMRS AGAEELDTLQ SPVDITLERA LEYIGPDEML EVTPDSIRMR KINKKKRN
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