Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | A9601_06401 |
Symbol | glgB |
ID | 4717341 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. AS9601 |
Kingdom | Bacteria |
Replicon accession | NC_008816 |
Strand | - |
Start bp | 559033 |
End bp | 561297 |
Gene Length | 2265 bp |
Protein Length | 754 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 640078353 |
Product | glycogen branching enzyme |
Protein accession | YP_001009033 |
Protein GI | 123968175 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0296] 1,4-alpha-glucan branching enzyme |
TIGRFAM ID | [TIGR01515] alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.556362 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATCGAGA CAATTCAAGC AGACTGGATT AAATCAGAAG CTATCAACCT AGAAAATTGT TGCAATGATA ATCCATTAAA AATATTAGGT CCTCATTTTT ATGAAGAACA ATGGGTAATT AGGGTATGGA TGCCTGAAGC CGACGAAGTT AAAATAAATT TTAAAAACAA TACCTATAAG GCGGAAAGCA TAAACCATAA ATGGCTTTTT GAAGCTATAT TGCCTGAAAA TCCAAATCAC AATTACGAAA TAAATATTTT ACGAGGAGGG GTCACACATA CACAACATGA CCCTTGGTCA TATAGAGAAG AATGGATGGG AGAAGTTGAT AGACATCTTT TTGCAGAAGG TAATCATCAT CATATTTGGG AAAAAATGGG AGCACATCTC ATTGAAGAAA AGAATCAAAA AGGGGTTATG TTTTGCATTT GGGCTCCAAA TGCAAAATCA ATTTCGATAA TTGGAGATAT AAATTCTTGG GATGGAAGAC ATCATCCAAT GCAAAAAAGA TTAGGGGGAA TTTGGGAACT ATTCATGCCA TCAATGCAAG AGGGCGATAC ATACAAATAC GAAATAAGAA CACAACAAGG TCATATCTAT GAGAAAGCTG ATCCATATGG TTTCCTTCAT GAAATCAGAC CTCAAAATGG TTCAATAGTT TCAAAGTTAA AAAACTTTAA TTGGAATGAT AGTTCTTGGA TTTCAAACAG AGATTCTTCT AGTCAAATTA ACAAGCCAAT TTCAGTTTAT GAAATGCATT TAGGGAGTTG GCTCCATGAA TCAACAGATA ATAAATATCT GGAGAACAAT GGTGATCCAA GAGACCCGGT ACCTGCAGCC GATTTAAAAC CTGGAACACG ATTATTAACT TATCCAGAAT TAACCAAGAA ACTAATCCCT TACGTAAAAG AAAGAGGATT TACTCATATT GAACTAATGC CAATATCTGA ACATCCTTTC GATGGTTCAT GGGGATACCA AGTTACAGGC TGGTATGCAC CAACGAGTAG ATTTGGTACC CCAAATGAAT TTAGAGAGTT TGTAAATAAA TGTCATGAAG AGGGCATAGG CGTAATTCTT GATTGGGTGC CCGGTCATTT TCCAAAAGAT AAACATGGTT TAGCATTTTT TGATGGCTGC CATCTTTATG AGCATGGAGA TTCACGAATA GGAGAACACA AAGAATGGGG GACCCTAATA TTTAATTACA GCAGAAACGA AGTAAGGAAT TTCTTAGTAG CAAATCTCGT TTATTGGTTT GAAGAGTTTC ATATTGATGG CATAAGAGTA GATGCTGTAG CTTCCATGCT TTACAGAGAT TATCTACGTC CTGATGGAGA ATGGATACCC AATGAAAATG GTGGGAATGA AAATATAGAA GCCGTTAAAT TTCTTCAACA GGCTAATCAT GTACTCTTCC AACACTTCCC AGGTGCACTT TCTATCGCTG AAGAATCAAC AACTTGGCCA ATGGTAACCA AACCAACTGA CATGGGAGGG TTAGGGTTTA ACTTGAAATG GAATATGGGA TGGATGCACG ATATGCTTGA TTATTTTGAA ATAGATCCTT GGTTTAGGCA ATTCCATCAA AATAGTGTGA CTTTCTCAAT TACATATAAC TATACAGAGA ACTTTATGCT TGCACTTAGT CATGATGAGG TCGTCCATGG GAAAAGTCAT CTTTTGCATA AAATGCCTGG CGATGACTGG AAGAAATATG CAAATACTCG AGCGTTACTA ACTTATATGT GGACCCACCC TGGTAAAAAA ACAATATTTA TGGGAATGGA ATTTGGGCAA AGACAAGAAT GGAATGTTTG GGATGATCTG CAATGGGAGT TACTAGAATT TGAACCCCAT AAAGGTATCA GAAACTTGAT TGATGACCTA AACGTTCTTT ATAAAAATGA ACCTGCATTA TGGAAAAATG ACTTTGATCC TTATGGATTC CAATGGATAG ATTGTAATGA CAAATCTAAT TCGGTTATAA GTTTCATGAG AAGAGAAAAC GATACTAATG AGTGGCTTGT TGTTGTTGCT AACTTTACAC CTAATACTCA TGAGTCATAC AAAGTAGGTG TTCCTATGGA AGGATTCTAT AGAGAAATAT TTAATTCAGA TGGCTCTAGA TACGGGGGCA GTAACAAAGG AAATTTGGGG GGTAAAGAAA CTATAAATTA CAATATTCAT GATTATCAAA ATGCTCTAGA ACTTGCTTTG CCCCCATTAA GCGTGAGTAT ATTCAAACAT CAATCAAAAA AATAA
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Protein sequence | MIETIQADWI KSEAINLENC CNDNPLKILG PHFYEEQWVI RVWMPEADEV KINFKNNTYK AESINHKWLF EAILPENPNH NYEINILRGG VTHTQHDPWS YREEWMGEVD RHLFAEGNHH HIWEKMGAHL IEEKNQKGVM FCIWAPNAKS ISIIGDINSW DGRHHPMQKR LGGIWELFMP SMQEGDTYKY EIRTQQGHIY EKADPYGFLH EIRPQNGSIV SKLKNFNWND SSWISNRDSS SQINKPISVY EMHLGSWLHE STDNKYLENN GDPRDPVPAA DLKPGTRLLT YPELTKKLIP YVKERGFTHI ELMPISEHPF DGSWGYQVTG WYAPTSRFGT PNEFREFVNK CHEEGIGVIL DWVPGHFPKD KHGLAFFDGC HLYEHGDSRI GEHKEWGTLI FNYSRNEVRN FLVANLVYWF EEFHIDGIRV DAVASMLYRD YLRPDGEWIP NENGGNENIE AVKFLQQANH VLFQHFPGAL SIAEESTTWP MVTKPTDMGG LGFNLKWNMG WMHDMLDYFE IDPWFRQFHQ NSVTFSITYN YTENFMLALS HDEVVHGKSH LLHKMPGDDW KKYANTRALL TYMWTHPGKK TIFMGMEFGQ RQEWNVWDDL QWELLEFEPH KGIRNLIDDL NVLYKNEPAL WKNDFDPYGF QWIDCNDKSN SVISFMRREN DTNEWLVVVA NFTPNTHESY KVGVPMEGFY REIFNSDGSR YGGSNKGNLG GKETINYNIH DYQNALELAL PPLSVSIFKH QSKK
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