Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | A9601_06281 |
Symbol | trpA |
ID | 4717329 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. AS9601 |
Kingdom | Bacteria |
Replicon accession | NC_008816 |
Strand | + |
Start bp | 548931 |
End bp | 549758 |
Gene Length | 828 bp |
Protein Length | 275 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 640078341 |
Product | tryptophan synthase subunit alpha |
Protein accession | YP_001009021 |
Protein GI | 161353817 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0159] Tryptophan synthase alpha chain |
TIGRFAM ID | [TIGR00262] tryptophan synthase, alpha subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAAATTA ATAAAAATGA ATCTTTATCT AAGGTAGATG AAATGTTTAG TGAGTTAAAA AATAAAAAAA AATTTGCTTT AATGCCTTTT ATAATGGCTG GGGATCCCAA TATTGAAATA ACGTCTGAGA TATTATTAAA GTTACAAGAA AATGGAGCTG ACCTTGTTGA ATTAGGCATC CCGTATAGTG ACCCACTTGC AGATGGTCCT GTTATTCAAT TGGCGGCCTC TCGCGCCTTA AAGTCAGGTA CTAGCTTAAG AAAAGTAATT AAACTTTTAG AGTCTTTAAA AGGTAAATTA AATATTCCCA TCATCCTTTT TTCTTACTTG AATCCATTAC TATGTTTTGG CTTTGAAAGG TTTTGTGAGA TGGCATCTGA TGCTGGAGTT TCTGGACTAA TAGTTCCTGA CCTCCCTTTG GAGGAAGCTT ATAAATTTTC TAAAATAGTT AGTCACCATT CTATGGACTT AATTTTATTA GTAGCGCCAA CTACTCCTTT TGAAAGAATG AAACAAATAT CAAATCATAC AAAAGGCTTT ACTTATTTAG TAAGTGTTAC GGGTGTCACT GGTGAGAGAA ATAAAATGGA AAATAGAGTA GAAAATCTTA TTGCTAAATT AAAAGATGTA AATAGCAATC CAATTGCTGT TGGTTTTGGA ATATCAACTC CAGAACACGT TAATAAAGTT CGTGAGTGGG GAGCAGATGG AGTAATTATT GGGAGTGCAT TTGTAAAAAG AATCTCGAGC TTAGGTGAAA AGGATGTTGT CGATCACGTT GGTGAGTTTT GTAAAGAAAT GCGTTTAGCT GCGGATCAAA AAAAATAA
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Protein sequence | MQINKNESLS KVDEMFSELK NKKKFALMPF IMAGDPNIEI TSEILLKLQE NGADLVELGI PYSDPLADGP VIQLAASRAL KSGTSLRKVI KLLESLKGKL NIPIILFSYL NPLLCFGFER FCEMASDAGV SGLIVPDLPL EEAYKFSKIV SHHSMDLILL VAPTTPFERM KQISNHTKGF TYLVSVTGVT GERNKMENRV ENLIAKLKDV NSNPIAVGFG ISTPEHVNKV REWGADGVII GSAFVKRISS LGEKDVVDHV GEFCKEMRLA ADQKK
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