Gene A9601_04731 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagA9601_04731 
Symbol 
ID4717171 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. AS9601 
KingdomBacteria 
Replicon accessionNC_008816 
Strand- 
Start bp412173 
End bp412844 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content31% 
IMG OID640078185 
ProducttRNA/rRNA methyltransferase (SpoU) 
Protein accessionYP_001008868 
Protein GI123968010 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0566] rRNA methylases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones6 
Plasmid unclonability p-value0.0125765 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCAATTT TGCCAAGAAG ATTTGAACGA ATCAAAAGTG TTTTAGATTG CAGAATGAAA 
AACTTGACTG TTTTAGTTGA GGATGTCAAT AAACCACATA ATTTATCTGC GATATTAAGG 
ACATGTGATG CAGCAGGAGT TTTCGAAGCA AATTTTATTA GCAAAACGAA TGCCGTTAAG 
ACTTTTAATA GTACTGCGCA AGGAAGTCAA AAATGGGTAA AACTGAATAA TCATGAAAAC 
ACTATCACAG CAATATCTGA TTTAAAGAAT AAGGGTTTTA AATTATATGG AACGACTCTT 
AATAGTGAAT CAGTAGATTA TAGAAATTTT GATTATTCTC AAAATACATG TTTTGTTCTA 
GGAGCAGAAA AATGGGGACT AAGTAATGAA CTTATATCAA TGGTTGATCA ATCAATTTTT 
ATACCTATGA GAGGTATGGT TCAATCTCTG AATGTTTCAG TTGCTGCTTC TATATTATTA 
TTTGAAGCTG TTCGCCAAAG AAAAAATAAA GGTATATTGC CCGCTAATGG AGAAGGGTTA 
AATATGGATG AATATCAAAA AACACTTTTT GAATGGTGTT ACCCAGAATT AGCTGAGGTG 
TATAAAAAAT CAGCTATAGA ATATCCAAAG TTGAATGATC AAGGAGAACT TGATCCTATT 
ACAGATAACT AA
 
Protein sequence
MSILPRRFER IKSVLDCRMK NLTVLVEDVN KPHNLSAILR TCDAAGVFEA NFISKTNAVK 
TFNSTAQGSQ KWVKLNNHEN TITAISDLKN KGFKLYGTTL NSESVDYRNF DYSQNTCFVL 
GAEKWGLSNE LISMVDQSIF IPMRGMVQSL NVSVAASILL FEAVRQRKNK GILPANGEGL 
NMDEYQKTLF EWCYPELAEV YKKSAIEYPK LNDQGELDPI TDN