Gene A9601_04511 details

Gene Information

• Locus tag: A9601_04511
• Symbol: lrtA
• ID: 4717149
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Prochlorococcus marinus str. AS9601
• Kingdom: Bacteria
• Replicon accession: NC_008816
• Strand: -
• Start bp: 390933
• End bp: 391517
• Gene Length: 585 bp
• Protein Length: 194 aa
• Translation table: 11
• GC content: 29%
• IMG OID: 640078163
• Product: light repressed protein A
• Protein accession: YP_001008846
• Protein GI: 123967988
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG1544] Ribosome-associated protein Y (PSrp-1)
• TIGRFAM ID: [TIGR00741] ribosomal subunit interface protein

Plasmid Coverage information

• Num covering plasmid clones: 17
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAATTT TAATCCATGG AAAGAATCTT GAGCTCACTG GAGCATTAAA AGAATATACT 
GAGGCAAAGA TAGAAAAAGC AACACATCAC TATAAGGATA TCGTTAAAGA AGCTGACATA 
CACCTTTCAA TCGAAAAGAA TCCAAGAGTC TCGTTCCAAA CAGCAGAAGT TACTATTTTT 
GCGAATGGTA CCGTAATTAG AGCTGAAGAA AAAACTGAGA ATCTATACTC AAGCATTGAT 
TTAGTTTCAA ATAAACTTTG TAGAAAATTA CGCAAATATA AAGAAAGAAA CAATAAAACA 
ATTCATAATA AACAATTTAA AAATAAAGAT TCTTTACCAA TTGAAAGTAT GGAATCAAAT 
TTTTTAGATA AAGCTTTATT TAAAGAAGGA ACTGAAGCAA GTCTGCCTGA GCCATCTATA 
AAAAATAAAT ACTTTGAAAT GACTCCAATT TCATCAGACG AAGCAAGAAA ACAATTAGAT 
CTAATTGATC ATGATTTTTA TGTTTTTCGA AACAAGAAAA ATAATGAACT TCAAGTTATA 
TATAAAAGGA ATCATGGAGG TTATGGACTG ATTCAATCTA AATAA 

 

Protein sequence

MKILIHGKNL ELTGALKEYT EAKIEKATHH YKDIVKEADI HLSIEKNPRV SFQTAEVTIF 
ANGTVIRAEE KTENLYSSID LVSNKLCRKL RKYKERNNKT IHNKQFKNKD SLPIESMESN 
FLDKALFKEG TEASLPEPSI KNKYFEMTPI SSDEARKQLD LIDHDFYVFR NKKNNELQVI 
YKRNHGGYGL IQSK