Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | A9601_02091 |
Symbol | spoT |
ID | 4716893 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. AS9601 |
Kingdom | Bacteria |
Replicon accession | NC_008816 |
Strand | - |
Start bp | 192737 |
End bp | 195046 |
Gene Length | 2310 bp |
Protein Length | 769 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 640077908 |
Product | guanosine-3',5'-bis(diphosphate) 3'-diphosphatase, (ppGpp)ase |
Protein accession | YP_001008604 |
Protein GI | 123967746 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0317] Guanosine polyphosphate pyrophosphohydrolases/synthetases |
TIGRFAM ID | [TIGR00691] (p)ppGpp synthetase, RelA/SpoT family |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCCGAGG CAGCTGCAAA TTCAAAAGAA AAAAACGAAA TTGAAGTTTC CAAAACTATT TTGCCTGAAA ATAAAAAATA TGAAAGTGAA TCTTTGAATT ATCAAATAAA CATTCCCGAT TGGCTTCTTA AAGATATTCA TAATTTTGAA AAATCAAATA AAGAAAATGA TCAGAATCAA AACCTTATAG TAAAGGCTTT TAAACTTGCT TATAAAGCTC ATGATGGACA ATTCCGTGCG AGCGGCGAAC CATACATTAT CCACCCGGTT GCTGTTGCAA ATCTCCTTAA AGAAATAGGC GCTAGTTCAT CTGTTATTGC TGCAGGCCTT TTACATGATG TAGTTGAAGA TACTGGCATT GATTTATCTG AAATAGAAAC AAATTTTGGA TTAGAAGTAA AAATACTTGT AGAGGGTGTA ACAAAATTAG GCGGCATTCA CTTTAACAAT AGGACTGAAG CACAAGCTGA AAATCTTAGG AAAATGTTTT TGGCTATGGC CAGCGATTTC AGAGTTGTCT TAGTTAAACT TGCAGATCGA CTTCATAACA TGAGAACAAT TGAATGGCTA AATGATGAGA AAAAACTAAG AATAGCGAGA GAAACAAGAG AGATTTATGC ACCATTAGCT AATCGACTAG GAATAAACAG ATTTAAATGG GAATTAGAAG ATTTAGCTTT TAAATTCCTA GAGCCTAAAG AATATCTAGA TCTTAAAGAT CAAATCGCCG TTAAAAGAAG TGATAGAGAA AAAAGATTAA AAGTAACTTT GAATCTTATG AAGGAAAACT TGATTTCAGC GGGTTTGAAA AATTTTGAAA TAACAGGAAG GCCAAAACAT CTTTATGGCA TCTGGAGCAA AATGGAAAGA CAACAAAAGC ATTTTCACGA GATTTATGAT GTTGCTGCCC TAAGAATTAT CGTGGACAAT TCAGATAGTT GTTATAGAGC TTTAGCAGTT GTTCATGATA CTTTCAAACC AATTCCAGGT AGATTTAAAG ACTATATAGG ATTACCAAAA CCTAATGGAT ATCAGTCCTT ACACACTTCT GTGATTGGAA GACATCGACC TATTGAAGTT CAAATTAGAA CTACTTCGAT GCATCAAATT GCTGAATATG GTATTGCCGC TCATTGGCAA TATAAAGAGG GTGGTTCTCC TGCTAAAAGT AATGCCGAGA GATTTAATTG GCTAAGACAA TTAGTAGAAT GGCAACAAGA AGGTAATGAA AGGGATCATA ATGATTATTT AGCTTCAATT AAAGAAGATT TATTTGATGA AGAAGTATTT GTAATCACTC CAAAAGGAGA TGTTGTTGGT TTAAGGAAAG GATCTACCGC GATAGATTTC GCCTACAGAA TCCATTCTGA AGTTGGAAAC CACTGTAATG GAATAAGAAT TAATGAAAAG CTTTCTCCAT TATCTACAGC ACTTCAAAAT GGTGACTTCA TAGAAATTTT AACAAGTAAT AATGCTACTC CAAGCTTGGA TTGGCTGAAC TTTGTAGTTA CGCCAACTGC TAAAAATAGA ATTCGCCAAT GGTATAAGAA AAGCCATCGT GATGAAACGA TTAAAAGAGG TAGAGATTTA CTTGAAAAAG AAGTAGGTAG AAACGGTTTT GAAGCATTAC TTTCTAGTGA AGCCATGAAA AAAGTTGCAA ATCGATGCAA TTTAAAAACT ACTGAAGACC TTCTTGCATC TCTTGGTTTT GGTGGTTTAA CTTTGCATCA AGTATTAAAC AGACTAAGAG AAGAAATAAA ATTACAGACA GAAGATGTAA AAAATGATTC TGACTCTGAA ATAGCAAAAT CTCTTAAAAG TAATAATAAT TTATCCACTA ATCAATCTAA TACAGCAGCT AAATCACCAA TTTCCGGGAT AGAAGGTCTT GATTACAGAA TAGGTAAATG CTGTTCCCCA CTCCCAGGCG AGGATATTAT CGGAACTGTG TCGCTCGGCA ACCATGGGAT AACTATACAT AGGGAAGATT GTGAAAATGT AATACCAATT CCAATAGAGA GAAGATTACC TGTCGGTTGG AATCAAGATA ATAAAACTGG CGATAATAAG TTTCCAATTC AGCTACGAAT AGAAGTAATT GATCGAGTTG GAGTTCTCAA AGATATTCTT ATGCGGTTAT CTGATAAAGG TATAAACGTT AGTGATGCCA ATGTTAAAAC TGCTTATGGT AAACCAGCTA TTATAAATCT TTGTGTAGGT CTTGAAAGTT ATAATCAACT TCACAAAACA ATTGAACAAA TTAAATCAAT GGCAGATGTT TTAGATATTG CCAGAGTTGG ACAAAGTTAA
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Protein sequence | MSEAAANSKE KNEIEVSKTI LPENKKYESE SLNYQINIPD WLLKDIHNFE KSNKENDQNQ NLIVKAFKLA YKAHDGQFRA SGEPYIIHPV AVANLLKEIG ASSSVIAAGL LHDVVEDTGI DLSEIETNFG LEVKILVEGV TKLGGIHFNN RTEAQAENLR KMFLAMASDF RVVLVKLADR LHNMRTIEWL NDEKKLRIAR ETREIYAPLA NRLGINRFKW ELEDLAFKFL EPKEYLDLKD QIAVKRSDRE KRLKVTLNLM KENLISAGLK NFEITGRPKH LYGIWSKMER QQKHFHEIYD VAALRIIVDN SDSCYRALAV VHDTFKPIPG RFKDYIGLPK PNGYQSLHTS VIGRHRPIEV QIRTTSMHQI AEYGIAAHWQ YKEGGSPAKS NAERFNWLRQ LVEWQQEGNE RDHNDYLASI KEDLFDEEVF VITPKGDVVG LRKGSTAIDF AYRIHSEVGN HCNGIRINEK LSPLSTALQN GDFIEILTSN NATPSLDWLN FVVTPTAKNR IRQWYKKSHR DETIKRGRDL LEKEVGRNGF EALLSSEAMK KVANRCNLKT TEDLLASLGF GGLTLHQVLN RLREEIKLQT EDVKNDSDSE IAKSLKSNNN LSTNQSNTAA KSPISGIEGL DYRIGKCCSP LPGEDIIGTV SLGNHGITIH REDCENVIPI PIERRLPVGW NQDNKTGDNK FPIQLRIEVI DRVGVLKDIL MRLSDKGINV SDANVKTAYG KPAIINLCVG LESYNQLHKT IEQIKSMADV LDIARVGQS
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