| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | A9601_01041 |
|---|
| Symbol | |
|---|
| ID | 4716787 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prochlorococcus marinus str. AS9601 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008816 |
|---|
| Strand | + |
|---|
| Start bp | 104410 |
|---|
| End bp | 106035 |
|---|
| Gene Length | 1626 bp |
|---|
| Protein Length | 541 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 29% |
|---|
| IMG OID | 640077802 |
|---|
| Product | ABC transporter, ATP binding component |
|---|
| Protein accession | YP_001008499 |
|---|
| Protein GI | 123967641 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0488] ATPase components of ABC transporters with duplicated ATPase domains |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.15596 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGATTAGAT TTGAAGGTGT AAGCAAAATT TATTCTACAG ATGTTGTTTT AAAAAATATT
AGTTGGGAGA TTAAGAAAGG AGAAAAAGTT GGCTTAGTTG GTTCTAATGG TGCAGGTAAA
TCAACCCAAT TTAAGATTTT AATTGGAGAG GAAGAGCAAA CAAGTGGAAC GATCATCAAA
GAGGGAAATC CTAAAATTGC CCATTTAAAG CAAGAGTTTG ATTGTAATTT GAATTTTTCA
GTGAGACAGG AATTAGAAAG TTCTTTTATA GATATACAAA TTGTTGCCAT TAAACTTTTA
GAAATTGAGA ATAAAATGAA ATCGTTGGAT ATAAAAAAAA ATTCCGATGA ACTTGAAATA
CTTGTTAATC AACTCGCAAA ATATCAAGCA AAATTTGAAG CGTTAGGAGG TTATAAAATG
CAATCTGATG TAGAAAAAAT ATTACCAAAA TTAGGCTTTT CTTTAGCAGA TGCTGATAAA
TTAGTTGGCA ACTTCTCAGG TGGTTGGCAG ATGAAAGTTG CTCTTGGAAA AATAATCTTA
CAAAAACCAG ATTTACTTTT ATTGGATGAA CCAACCAATC ATTTAGATTT AGAAACTATT
TTTTGGTTGG AAGAATATCT ATCATCGCTT AAAATTGCAG TGATTATAAT TAGCCATGAT
AGATATTTCT TAGATAAATT ATGTAAAAAA ATAATTTTTG TAGATAGAGG AATATCTGAA
ACATATAATG GGAACTATTC TTTTTTTGTC GAACAGAAAT CTTTGAATGA AGAATCACAA
AATAAAGCAT ATCAATTACA ACAAAAAGAA ATTGAGTTAC AAAAGAGGTA TATAGATAGA
TTTAGAGCTA GTGCAACAAG AAGTTCTCAA GCAAAGAGTA GAGAAAAACA ATTAAAAAAG
ATTACTAAAA TTGAGGCTCC CATAGCAAAA TCAAAAAGTC CTGTTTTTAA TTTTCCAGAG
TGCCCTCGCT CTGGAAAATT AGTTCTAAAT ATTAAAAATT TGTCCCATAG TTTCGAGGAT
AAAATTCTTT TTCTAGATAT TAATTTAAAG ATTTCTTCTG GGGAGAAAAT AGCAATATTG
GGCCCTAATG GATGCGGCAA ATCTACATTG CTTAAAATTA TTATGAAAAA AATATCTCCT
GAAATTGGAG AAATTAATCT TGGTAAACAT AATATAATTA CTAACTATTA TGAACAGAAT
CAGGCTGAAG CGCTTTCACT TGATGAAACG GTTATTGATT TAATATGTAA TAAGTCTCCA
GAATGGTCCC AAAAAAAAGT TAGAACATTT TTAGGGGGTT TTGGCTTTCA AAATGAAACT
GTTTTTAAAT ATATTAAACA ACTCAGTGGG GGAGAAAAGG CAAGATTAGC ATTGGCGCTC
ATGATTATTA ATCCTAGTAA TTTCCTTCTT TTGGACGAAC CAACTAATCA TTTGGATCTG
CAATCTAAGG AAAACTTAGA ATTAGCAATT AAAAATTATA AAGGTTCATT ATTAATCATT
TCTCATGATC GGTATTTTAT TTCAAAGGTT GCAAATAGAA TTATTGAAAT TAAAGATTCA
AAGTTATATT CATATGACGG TAATTATGAA TATTTTTTAG AAAAAACTCA AAGCCAAAAA
ATTTGA
|
|---|
| Protein sequence | MIRFEGVSKI YSTDVVLKNI SWEIKKGEKV GLVGSNGAGK STQFKILIGE EEQTSGTIIK
EGNPKIAHLK QEFDCNLNFS VRQELESSFI DIQIVAIKLL EIENKMKSLD IKKNSDELEI
LVNQLAKYQA KFEALGGYKM QSDVEKILPK LGFSLADADK LVGNFSGGWQ MKVALGKIIL
QKPDLLLLDE PTNHLDLETI FWLEEYLSSL KIAVIIISHD RYFLDKLCKK IIFVDRGISE
TYNGNYSFFV EQKSLNEESQ NKAYQLQQKE IELQKRYIDR FRASATRSSQ AKSREKQLKK
ITKIEAPIAK SKSPVFNFPE CPRSGKLVLN IKNLSHSFED KILFLDINLK ISSGEKIAIL
GPNGCGKSTL LKIIMKKISP EIGEINLGKH NIITNYYEQN QAEALSLDET VIDLICNKSP
EWSQKKVRTF LGGFGFQNET VFKYIKQLSG GEKARLALAL MIINPSNFLL LDEPTNHLDL
QSKENLELAI KNYKGSLLII SHDRYFISKV ANRIIEIKDS KLYSYDGNYE YFLEKTQSQK
I
|
|---|
| |