Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | A2cp1_4467 |
Symbol | |
ID | 7300523 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anaeromyxobacter dehalogenans 2CP-1 |
Kingdom | Bacteria |
Replicon accession | NC_011891 |
Strand | - |
Start bp | 4974872 |
End bp | 4976641 |
Gene Length | 1770 bp |
Protein Length | 589 aa |
Translation table | 11 |
GC content | 78% |
IMG OID | 643597273 |
Product | PAS/PAC sensor signal transduction histidine kinase |
Protein accession | YP_002494850 |
Protein GI | 220919546 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0773722 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGCGGGGA CGCGCAGGAG GCCGGGGCGG AAGGCGGCGA AGCGCGCGCG CGCGCCGAGC GCGCGGCCGA GGCCGCGACC GAAGCCGGGC CCGAGGCGCC GGCCGGCCCG GGCCCCGGTG GCGCCCGCTC CGTCCGACGC GGTGCTGCTG ACGCTCTCGC GCGAGCTCGC CGAGGCGCGC GCCGAGGACC AGATCAGCGG CGCCCTGGCC CGCGCGCTCG ACGCCGTGTT CCCGGGCCGC GCGTTCTCGA TCCGGCTGGT GGACCCGCGC ACGCTCGCGC TCACCACCTT CTACGCGAGC GGGCGCCTCC GCCCCGACCG CCCCGGCCGG CTGGTGCTCG GGCGCGGCGC GGTGGAGGAG GCCGGGCTCT CGGCGGCCGC CCTCGGCGCC GGCGGCGTCC GGGTGGTCGA GCGGGAGGAG CCGCTGTTCG AGGGCTACGA GGAGGCGACC TCGGTGCCGC TCGCGGTCTC GGGCGCGCTC TACGGCGTGC TCTCGCTCGA GTACGCGCGC GGCGGCCCCG GGGCGCCGGC CGAGGACCGC CCGCTGCTGC GCCGGGTGGC CGGCCACGCC GCGCTGGGCG TGCGCAACGT CCGCTCCATC GACGAGCTCA CCTACCTCAA GACCTACCTC GAGGAGCTGA TCGAGCACGC GAACGCGCTC ATCTGGGCGG TGGACCGCGA CCGCTCGGTG ATCGTCTGGA ACGCCGCCCT GGCGAAGCTC TCCGGGCTCG CCGCCGGCGA GGTGCTGGGG GGCGAGGCGC TCCTGCGCGC GCCCGACGAC GAGCGCCCGC GCCTCGCCGC GCTGCTGGCG CGCAGCCTCG GCGGCGAGCG GGTGGACGGG GTCGAGACGC GGCTCATCCG GCGCGACGGC GGCGAGGTGC GGGTGGCGGT GAACACCGCG CCCATCGCCG GCGCGAGCGG CGAGGTCGAG GGCGTCATCC TCATCGGCCA GGACCTCACC CTGCTCCGCT CCATGCAGGC CGCCGCCGAG CACGCCGAGC GCCTGGCCGC CATCGGCCGC CTCGTGGCGG GCGTGGTCCA CGAGCTGAAC AACCCGCTCA CCGCGGTGAC CATGTACTCG GACGTGCTGC TCGAGCGCTT CACCGCCCGC GCGCAGGATC CCTCCGACGT CGAGAAGCTC CGCGCCATCA AGGACGCGGG CCAGCGCATC CAGCGCCTCG CCCGCGACCT CATCACCTAC GCCCGCCCCA CCGGCGCCCG CACCGAGGCG GTGGACCTCG TGCCGGCGGT GGAGGAGGCG GGGCGCATGG CGAAGACCGC GCTCAAGGAA TCGGGCGCGG CGCTGGTGCG CGACGGCGGC GAGGGGCCGT ACGTGGTGGA GGGCAACCGG CCCAGCCTGG TGCAGGTGGT GCTCGCGCTG GTGACGAACG CCGCCCAGGC GGTGCCGTCC GGCGCCGAGG TGCGGGTGGC GCTCTCGCGC GAGGACGGCG AGGTGGTGCT CACGGTCGCC GACGCGGGCG CGGGCATGCC GCCGGAGGTG GCGGCGCGCG CCTTCGAGCC GTTCTTCACC ACCCGCGCCG GCGTGGGCAT CGGGCTCGGC CTGCCCATCG TGCAGGGGAT CGTGGAGCGC CACGGCGGCA GCGTCAGCCT CTCCACGGCG GCCGGCCGCG GCACCACCGT GACCGTCCGC CTGCCGGCCC GCGCCGCCAC CGCCACCGAG CTGCGCCCGG TCGGCCCGGC CGACGCGCGC CAGCGCCCGC CCGGCGACAC GCCCACGCAC CCGCGCCTGC CGCGGCCGCC GCGCGGGTAG
|
Protein sequence | MAGTRRRPGR KAAKRARAPS ARPRPRPKPG PRRRPARAPV APAPSDAVLL TLSRELAEAR AEDQISGALA RALDAVFPGR AFSIRLVDPR TLALTTFYAS GRLRPDRPGR LVLGRGAVEE AGLSAAALGA GGVRVVEREE PLFEGYEEAT SVPLAVSGAL YGVLSLEYAR GGPGAPAEDR PLLRRVAGHA ALGVRNVRSI DELTYLKTYL EELIEHANAL IWAVDRDRSV IVWNAALAKL SGLAAGEVLG GEALLRAPDD ERPRLAALLA RSLGGERVDG VETRLIRRDG GEVRVAVNTA PIAGASGEVE GVILIGQDLT LLRSMQAAAE HAERLAAIGR LVAGVVHELN NPLTAVTMYS DVLLERFTAR AQDPSDVEKL RAIKDAGQRI QRLARDLITY ARPTGARTEA VDLVPAVEEA GRMAKTALKE SGAALVRDGG EGPYVVEGNR PSLVQVVLAL VTNAAQAVPS GAEVRVALSR EDGEVVLTVA DAGAGMPPEV AARAFEPFFT TRAGVGIGLG LPIVQGIVER HGGSVSLSTA AGRGTTVTVR LPARAATATE LRPVGPADAR QRPPGDTPTH PRLPRPPRG
|
| |