| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | A2cp1_4435 |
|---|
| Symbol | |
|---|
| ID | 7300491 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaeromyxobacter dehalogenans 2CP-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011891 |
|---|
| Strand | - |
|---|
| Start bp | 4937519 |
|---|
| End bp | 4938490 |
|---|
| Gene Length | 972 bp |
|---|
| Protein Length | 323 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 643597241 |
|---|
| Product | NAD-dependent epimerase/dehydratase |
|---|
| Protein accession | YP_002494818 |
|---|
| Protein GI | 220919514 |
|---|
| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCGCC AGGCTGCGAT GAGGCTACTG GTCACCGGCG CGAGCGGGTT CGTTGGGCGG
GCGGTGCTCC GGAACGCCGC GGAGCGCGGA TGGTGCGTCC GCGCGGCGGT GCGGAGCCCC
TCGTCGCCCA GACCACCGCA CGCGCACGAG CACGTGGTGG CGGATCTGGG ATCGGCGGAC
TGGACGACCG CCGTCCACGG GGTCGATGCG ATCATCCACC TGGCAGCGCG GGTGCACGTC
ATGCGCGACC GGTCCGGAGA TCCACTCTCG GAATTCCGCA GGGTGAACGT GCTCGGAACC
GAGCGTCTCG CGCAGGCCGC CGCGGCAGCC GGGGTGCACC GCTTCGTGCT GGTAAGCACC
GTGAAGGTGC ACGGCGAGGA ACGCGATGAG GCGTACCGGG AGAGCGACGC GCCTGCGCCG
GGCGAGCCAT ACGGGCACAG CAAGCTGGAG GCGGAGCGCG CCGTCGATGC AGTGGCCACC
GCGACGGGCC TCGGCGTCGT CGTCGTTCGG CCTCCCCTGG TCTACGGGCC GGGGGTACGG
GCCAACTTCC GCGCGATGCT GAAAGCAGTC GATCGCGGGA TCCCGCTGCC GCTTGCGAAC
GTGCGAAACC GGCGGAGCAT GATCTACGTC GAGAATCTCG CGGACGCGCT GCTGGCGTGC
GCGGCGGACG CGCGCGCGGC CGGACGTACC TATCTCGTGA GCGACGGCGA GGACCTGTCC
ACCCCGGAGA TGCTCCGTAC GCTGGCCGGG GCGCTCGGAC GACCCTCGCG CCTCTTCCCT
GCGCCCCCGG GCGCGCTCTG GCTGGCGCGA CGCCTCCCGA GGTTCGGTGC CGCAGCTCGG
CGGTTGATCG GTTCGCTCAC GGTCGATCTC TCGAAGATCC AGGCGGAGCT CGGGTGGCGC
GCCCCGGTTC CGGTTTCGGT GGGGCTCGCT GACACGGCTC GCTGGTTCCT GGATCGAGGT
GGCGGGGAAT GA
|
|---|
| Protein sequence | MSRQAAMRLL VTGASGFVGR AVLRNAAERG WCVRAAVRSP SSPRPPHAHE HVVADLGSAD
WTTAVHGVDA IIHLAARVHV MRDRSGDPLS EFRRVNVLGT ERLAQAAAAA GVHRFVLVST
VKVHGEERDE AYRESDAPAP GEPYGHSKLE AERAVDAVAT ATGLGVVVVR PPLVYGPGVR
ANFRAMLKAV DRGIPLPLAN VRNRRSMIYV ENLADALLAC AADARAAGRT YLVSDGEDLS
TPEMLRTLAG ALGRPSRLFP APPGALWLAR RLPRFGAAAR RLIGSLTVDL SKIQAELGWR
APVPVSVGLA DTARWFLDRG GGE
|
|---|
| |