Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | A2cp1_4429 |
Symbol | |
ID | 7300485 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anaeromyxobacter dehalogenans 2CP-1 |
Kingdom | Bacteria |
Replicon accession | NC_011891 |
Strand | - |
Start bp | 4929718 |
End bp | 4931961 |
Gene Length | 2244 bp |
Protein Length | 747 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 643597235 |
Product | capsular exopolysaccharide family |
Protein accession | YP_002494812 |
Protein GI | 220919508 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3206] Uncharacterized protein involved in exopolysaccharide biosynthesis |
TIGRFAM ID | [TIGR01005] exopolysaccharide transport protein family [TIGR01007] capsular exopolysaccharide family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACCCCGA AGCCCGGAGG CCCGGCCCTG GAGATGGTCC CCGACAAGCG CCCCGCGCCG CCGCCCGAGC CGGCCTACGC GGGCGACGGC GGCGACGGCG ACGAGGTCAG CCTCGCCGAG TACCTCGACG TGCTGGTGCA GGGGCGCTGG CTCATCGCCG GCGCGGCCGC GGTCGCGCTC GTGTGCGGCG TCGCCTACGC GCTCCTCGCC ACGCCGGTGT ACCGCTCCGA CGCGCTCGTG CAGGTGGAGG ACAAGAAGGG CGGCACCGGA GGGCTGGGCG ACCTCTCGGC GCTCTTCAGC GAGGCCTCGC CGGCCGAGAC CGAGATGGAG ATCCTCCGCT CGCGCTCGCT GGTCGGCTCG GTGGTGGACG CGCTGAAGCT CGAGATCTCG GCCGAGCCGC GCCGCTTCCC GGTGGTGGGC CGCTTCCTGG CGCGCCGGCA CAGGGGCGAC GCGCCGGCCT CGGCGCTGCC CGGGTTCGGG CGCTTCGGCT GGGGCGGCGA GAAGCTCACG CTGGGCCGGC TGGCGGTGCC GGAGGAGCTG GAGGGCGAGC CGCTCACGCT GGAGGCCCGC GAGGGCGGGC GCTTCGCGCT GCTCGATCCG GACGGCGAGC TGCTGGTCGA GGGCGCGGCG GGCGCGGCCG CCTCGGGGCG GCGCACCGAG CTGTTCGTGG CGGAGCTGGT GGCGCGCCCG GGCACGCAGT TCCGGGTCTC GCACCGGCCG CGCGACGCGG CCATCGCCGA CCTGCAGGAG GACCTGCGCA TCTCGGAGAA GGGCAAGAAG ACCGGCGTCA TCCAGCTCGC GCTGGAGGAC GAGGACCCGG CCCGCGCCGC GGCCATCCTC GACGCGCTCT CGAGCGCCTA CCTGCGCCAG AACGTGGAGC GCAAGAGCGC CGAGGCCGAG AAGACGCTCG AGTTCCTGGA GACGCAGCTC CCCGAGCTGC GCGGCAAGCT CGACGTGGCC GAGCGCGACC TCGAGTCCTA CCGCTCGGCG AAGGGCAGCG TCGACGTCTC CATGGAGACG CAGGCCGCGC TCACCCGCGC GGTGGACATC GAGAAGGCCG CCTCCGAGCT GCAGCTCGAG ATCGCCGCCC TGCGCCAGCG CTTCACCGAG GACCACCCGC TGCTCATCGC CGCCCGCCAG AAGATGGGCC GCCTCGACGA GGAGCGCCGG AACCTCGAGG CGCGCATGCG CAAGCTGCCG GAGGCGGAGC TGGAGTCGGC CCGCCGCCTG CGCGACGTGA AGGTCGCGAA CGAGCTGTAC CTCACGCTCC TCAACAAGGC GCAGGAGCTG AAGGTCGTGA AGGAGGGCAC GGTCGGCAAC GTGCGCATCC TCGACGCCGC GCTCGTGCCC CTGAAGCCGG TCGCGCCGAA GCGCGGCGCG GTGGTGGCGC TGGCGCTGCT CCTCGGCCTG GCCGGCGGGG TGGCGCTCGC GTTCGTCCGC AAGGCGCTCG ACCAGGGCGT CGAGGATCCG GACGCGCTGG AGCGGGCCAC CGGGGTGGGC GTCCACGCCT CGGTGCCGCA CAGCGATGCG GAGGGGATCG CCACCCGCGC GGCGGGGCAC GCCGGCAAGC ACCCGGTGCT CGCCCGCACC GATCCGAACG ATCTCGCGGT CGAGGCGCTC CGCAGCCTCC GCACCAGCGT GCAGTTCGCG CTGCTCGAGG CGAGCTCCAA CGTCGTCACG GTGGGCGGCC CGGCGCCGGG CATCGGCAAG TCGTTCGTCA CCGCGAACCT CGCGGTCCTG CTGGCCGAGG CCGGCAAGCG CGTGGTGGTG GTGGACGCCG ACCTCCGCCG CGGCCACCTG CACCGCTTCC TGGGCGGCGA GCGCGCGCCG GGGCTCACCG ACGTCCTGAG CGGCGCCCAC ACGCTCGCGG GCGCCCTCCG CACGACCGAG CACGAGAACA TCCGGCTCCT CACCACCGGC ACCATCCCGC CCAACCCGGC GGAGCTGCTC GGCTCGGAGC GCTTCCAGCG GCTGCTCGCC GAGCTGTCGG CGACGTGGGA CCTCGTGGTG GTGGACACCC CGCCCATCCT CGCGGTGGCC GACGGCGCGC TCATCGCGCG CCAGGCGGGC GTGAACCTGT TCGTGGTGAA GGCGGGCAAG CACCCGATCC GCGAGATCCA GGCCGGCCTG CGCGCGCTCA CCCGCGCCGG CGCGCGCGTC CACGGCATCG TGATGAACGA CGTGCGCCTC GACCGCGGCC TGGGCCGGCG CAGCGCGTAT CACTACCAGT ATTCGTACAA GTAG
|
Protein sequence | MTPKPGGPAL EMVPDKRPAP PPEPAYAGDG GDGDEVSLAE YLDVLVQGRW LIAGAAAVAL VCGVAYALLA TPVYRSDALV QVEDKKGGTG GLGDLSALFS EASPAETEME ILRSRSLVGS VVDALKLEIS AEPRRFPVVG RFLARRHRGD APASALPGFG RFGWGGEKLT LGRLAVPEEL EGEPLTLEAR EGGRFALLDP DGELLVEGAA GAAASGRRTE LFVAELVARP GTQFRVSHRP RDAAIADLQE DLRISEKGKK TGVIQLALED EDPARAAAIL DALSSAYLRQ NVERKSAEAE KTLEFLETQL PELRGKLDVA ERDLESYRSA KGSVDVSMET QAALTRAVDI EKAASELQLE IAALRQRFTE DHPLLIAARQ KMGRLDEERR NLEARMRKLP EAELESARRL RDVKVANELY LTLLNKAQEL KVVKEGTVGN VRILDAALVP LKPVAPKRGA VVALALLLGL AGGVALAFVR KALDQGVEDP DALERATGVG VHASVPHSDA EGIATRAAGH AGKHPVLART DPNDLAVEAL RSLRTSVQFA LLEASSNVVT VGGPAPGIGK SFVTANLAVL LAEAGKRVVV VDADLRRGHL HRFLGGERAP GLTDVLSGAH TLAGALRTTE HENIRLLTTG TIPPNPAELL GSERFQRLLA ELSATWDLVV VDTPPILAVA DGALIARQAG VNLFVVKAGK HPIREIQAGL RALTRAGARV HGIVMNDVRL DRGLGRRSAY HYQYSYK
|
| |