Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | A2cp1_4400 |
Symbol | |
ID | 7300456 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anaeromyxobacter dehalogenans 2CP-1 |
Kingdom | Bacteria |
Replicon accession | NC_011891 |
Strand | + |
Start bp | 4896829 |
End bp | 4898148 |
Gene Length | 1320 bp |
Protein Length | 439 aa |
Translation table | 11 |
GC content | 79% |
IMG OID | 643597206 |
Product | membrane protein |
Protein accession | YP_002494783 |
Protein GI | 220919479 |
COG category | [S] Function unknown |
COG ID | [COG4872] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.849144 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAGCACG CATCGCGCCG GTTCCGCGAG GAGCTTCGCC GGGAGCTCCC GCGCTGGCAG CAGGACGGGC TGGTCTCGCC CGACGCGGCC GCGGCGCTCT GGTCGCGCTA CCGGCTGGCC GAGGCCGAGC CGGCGTCCGG GCCGGGCCTC CTGCCGGTGT ACGCGCTGGG CGCGCTGCTG GTGGGCGCGG GCGTGGTGTC GCTGGTGGCC TGGCACTGGG AGGAGATGGG CCCGGCGCTC CAGCTCGCGG TCATCGGCGC GGCCATGGTG GCGAGCCACG CCGGCGGCGT GGCGCTGTGG CGCGGCCGCG CGCCGCGGCT CGGGCACGCG CTCACCCTGC TCGGCACCGT GATCTTCGGC GCGAACGTGG GGCTGGTGGC GCAGATCTTC CACGTGAGCG GCGTGTGGTG GGGCGGGTTC GCCGCGTTCG CGGCGGGCGC GCTCGCCGCA GGCGTCGCCT ACCCCAGCCT GCCGCACCTG CTGCTCGGCG CGATCCTCGC GCTGTGGGTG GCGGGGCCCG GCCTCGCCCA CGATCACCCC GGGCCCGGCC TCGCCGCCGT CTGGGTGCTC TCGCCCGCGC TGGTGGCGCT GGCCTGGCGC GAGCGGTCGC GCGCGCTCGC GGTGGTGGCG GCGCTCGGGC TCGCGGTCGT CTCCGGGGCC GGGCTGTTCG GCGCGCGCCT GGACCGCGGC TGGGTGCTGG TGGTGCTGTG CCTGGCGGCC GCGCTCTGCG CGACCCCGCT CGCCGCCGCC CCGCTCGCCT CGCGCTCCGA CACCGGCGCG CGGCTCTCGG GGGCGCTGCG GGTCACCGGG CGGCTGCTGT TCTACGCCGC CGCCGCGGTG CTCTCCTTCA CCGAGCTCGC CCACGAGCTG CGCTTCCGCG GCGCGGTGCC CGGACTCATC CTGGCGGCCG CCGCGCCCGC CGCCGCGTTC GCGGTCGCGG CGCTCGCCAT CGGGCTCCGC CGCCCGGAGG TGGACCCGCT CGCGCGCGGC GAGGCGATGC TGGTGGGCGC GACCGTCGTC GCGCTCGCCG CCGGCCTGTC GCTCGAGACC GGCACCGGCA CCGCGCTCGT CGCGAACCTG GCCATCGCGT TCCTCGCGGC GGGGCGCATC GTGCGCGGGC TCTCCGGCCT GCGCCGCGCG CCGTTCTGGG AGGGGATGGC GGTCGCGGGC GCGCTCACGC TCGTCCGCTT CATCTCCATC GACACCGGCC TCTGGCTGAA GGGCGCCGGC TTCATCGCCT GCGGCGCGGC GGTGCTGCTC GGCGGCATCG CGTTCGAGCG CCGGCGCGCC CGCGCCGCGG AGGTGACCCA TGCTGCGTGA
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Protein sequence | MEHASRRFRE ELRRELPRWQ QDGLVSPDAA AALWSRYRLA EAEPASGPGL LPVYALGALL VGAGVVSLVA WHWEEMGPAL QLAVIGAAMV ASHAGGVALW RGRAPRLGHA LTLLGTVIFG ANVGLVAQIF HVSGVWWGGF AAFAAGALAA GVAYPSLPHL LLGAILALWV AGPGLAHDHP GPGLAAVWVL SPALVALAWR ERSRALAVVA ALGLAVVSGA GLFGARLDRG WVLVVLCLAA ALCATPLAAA PLASRSDTGA RLSGALRVTG RLLFYAAAAV LSFTELAHEL RFRGAVPGLI LAAAAPAAAF AVAALAIGLR RPEVDPLARG EAMLVGATVV ALAAGLSLET GTGTALVANL AIAFLAAGRI VRGLSGLRRA PFWEGMAVAG ALTLVRFISI DTGLWLKGAG FIACGAAVLL GGIAFERRRA RAAEVTHAA
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