Gene A2cp1_4378 details

Gene Information

• Locus tag: A2cp1_4378
• ID: 7299541
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Anaeromyxobacter dehalogenans 2CP-1
• Kingdom: Bacteria
• Replicon accession: NC_011891
• Strand: -
• Start bp: 4871480
• End bp: 4873363
• Gene Length: 1884 bp
• Protein Length: 627 aa
• Translation table: 11
• GC content: 74%
• IMG OID: 643597184
• Product: signal transduction histidine kinase, nitrogen specific, NtrB
• Protein accession: YP_002494761
• Protein GI: 220919457
• COG category: [T] Signal transduction mechanisms
• COG ID: [COG3852] Signal transduction histidine kinase, nitrogen specific
• TIGRFAM ID: [TIGR00229] PAS domain S-box

Plasmid Coverage information

• Num covering plasmid clones: 9
• Plasmid unclonability p-value: 0.055155
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGATCCTCG ACGTGTTCCG GCGGTTCCTG GAAGGCGAGG GGCGCACCCT GCTCCTCGCC 
GGCTCGGCGC GCGAGGCGCT GGCGCGCGCG GCGGAGCCCG GCGACATCGA CGTGGCGCTG 
GTGGACAAGA ACCTGGGCGA CGGCTCGGGG CTCGACGTGG CCCGCCAGCT CAAGGCGGCC 
AAGCCCGACG TCGAGGTGAT CCTGGTCACC GGCTACGCCT CCCTCGACTC CGCCATCCAG 
GCGGTGCAGA TCGGCGCGTT CGACTACGTG ACGAAGCCGG TCTCCGATTA CGACGCGCTC 
AACCTCAAGG TCGAGAACGC GGTCGAGAAG GTGCGGATGA AGCGCTCGCA GCGCGAGCTG 
GTGGCGCGCC TGGTGGAGAG CGAGGCGCTG CACCGCGGCG TGTTCGAGAC CTCCTCCGAC 
GCCATCCTGC TGGTGGACGC GGAGTCGGGC CGGCTGGAGG ACGCGAACCC GGCCGCCGAG 
CGGCTCTACG GCCGCGATCG CGACGCGCTC CGCGACCTGC GCTACGCCGA CCTGCTCGAG 
GAGGGCGGCG GCGAGGGCGG CCCGGCGGCG GGGATCCACG CCGCCCCGGG GCGGCACCGG 
CGCGCCGATG GGACGGCCTT CCCGGTCGAG GTGACGGTGG ACGCGCTGCG CCTGCACGAC 
CGCGGGCTGC GCGTGGTGTC GGTGCGCGAC ATGTCGGAGC GGGAGCGCGC CGAGGCGGAG 
CGCCGCGAGC TGGAGCAGAA CCTCCGCCAG GCGCAGAAGA TGGAGGCGGT GGGCCGGCTC 
GCCGGCGGCG TCGCCCACGA CTTCTCCAAC GTGCTCGCGG TGGTGCTCGG CTACTCCGAG 
CTGCTGGTGC GGGACCTGCC GACCACCGAT CCGCGCCTGC GCGAGTGCGC CGACGGGATC 
ATCGAGGCGG CGCACCGCGC GGTGGGCGTC ACCCGGCAGC TCCTCACGCT CTCCCGCAAG 
AAGCTGCTCC GGCCGGAGGT GCTGTCGCTC AACAAGGTGG TGCAGGACCT CGGCAAGCTC 
CTCGGGCGCG CCATCGGCGA GCGGATCGAG GTCACCACCA CGCTCCAGGA GCAGCCGTGG 
CCGGTGCTCG CCGACGCCGA CCAGCTCGCG CAGGTGCTGC TCAACCTGGC GGTGAACGCG 
CGCGACGCGA TGCCCGACGG CGGGCCGCTG CACATCGCCA CCGCGAACGT GGAGGTGCCG 
CAGGCGCTGC GCGAGCTCTC GCTGCCCGCC GGGCGCTACG TGACGCTCAC GGTGCGCGAC 
TCCGGCATGG GCATGACGGA GGAGGTGCGG GCGCGCATCT TCGAGCCGTT CTTCACCACC 
AAGGAGACCG GCACCGGGCT CGGGCTCGCC ACGGTCTACG GCATCGTGCG GCAGGCCGGC 
GGCGCCATCC GGGTGGAGTC GCGCCCGGGC GCGGGCACGT CCTTCACCGT GTACCTGCCG 
GCCGCCGACG AGGCGGCGGC GCGGGTGGCG GTCGCGGTGC CGGTGGCGGC GCCGCGCGGG 
CTGGGCGAGA CGGTGGTGCT GGCCGAGGAC GAGGACGCGC TCCGGACGCT GCTCGGCCGC 
GTGCTCTCCG GCAGCGGCTA CCAGGTCATC TCCGGGCGGA ACGGCGCCGA GGCGCTGGAG 
GCGGCGCGCG CCCGCGGCGG CCGGGTGGAC GTGCTGCTCA CCGACCTCGT CATGCCGCGC 
ATGACCGGCG CGGAGCTGGC CGAGGCGCTC ACGCCGGGGC AGCCCGGGAT GAAGGTGCTG 
TTCATGACCG GCCACACCGA CGACGTGCTG GTGCAGGACC GGCTGGTGGA CGGCGACGTG 
GAGCTCATCC AGAAGCCGTT CACCAGCGAG GCGCTGCTCG CGCACCTGCG CCGGCTGCTC 
GGGCCGCCGC GCGTGGCGGC GTGA 

 

Protein sequence

MILDVFRRFL EGEGRTLLLA GSAREALARA AEPGDIDVAL VDKNLGDGSG LDVARQLKAA 
KPDVEVILVT GYASLDSAIQ AVQIGAFDYV TKPVSDYDAL NLKVENAVEK VRMKRSQREL 
VARLVESEAL HRGVFETSSD AILLVDAESG RLEDANPAAE RLYGRDRDAL RDLRYADLLE 
EGGGEGGPAA GIHAAPGRHR RADGTAFPVE VTVDALRLHD RGLRVVSVRD MSERERAEAE 
RRELEQNLRQ AQKMEAVGRL AGGVAHDFSN VLAVVLGYSE LLVRDLPTTD PRLRECADGI 
IEAAHRAVGV TRQLLTLSRK KLLRPEVLSL NKVVQDLGKL LGRAIGERIE VTTTLQEQPW 
PVLADADQLA QVLLNLAVNA RDAMPDGGPL HIATANVEVP QALRELSLPA GRYVTLTVRD 
SGMGMTEEVR ARIFEPFFTT KETGTGLGLA TVYGIVRQAG GAIRVESRPG AGTSFTVYLP 
AADEAAARVA VAVPVAAPRG LGETVVLAED EDALRTLLGR VLSGSGYQVI SGRNGAEALE 
AARARGGRVD VLLTDLVMPR MTGAELAEAL TPGQPGMKVL FMTGHTDDVL VQDRLVDGDV 
ELIQKPFTSE ALLAHLRRLL GPPRVAA