| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | A2cp1_4255 |
|---|
| Symbol | |
|---|
| ID | 7298330 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaeromyxobacter dehalogenans 2CP-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011891 |
|---|
| Strand | - |
|---|
| Start bp | 4736123 |
|---|
| End bp | 4739404 |
|---|
| Gene Length | 3282 bp |
|---|
| Protein Length | 1093 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 643597061 |
|---|
| Product | heavy metal efflux pump, CzcA family |
|---|
| Protein accession | YP_002494638 |
|---|
| Protein GI | 220919334 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG3696] Putative silver efflux pump |
|---|
| TIGRFAM ID | [TIGR00914] heavy metal efflux pump (cobalt-zinc-cadmium) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATCAAGG CCATCATCCG CTTCTCCGCG CACAACAAGT ACCTGGTCAT CGCGGCCACG
GTGGTGGCGC TGGTCGGCGC GTGGTGGACG ATGCGGAACA TCCCGCTCGA CGCGCTGCCG
GACCAGTCCG ACACCCAGGT CATCGTCTAC TCGCAGTGGG ATCGCAGCCC GGACATCATC
GAGGACCAGG TCACGTATCC GATCACCACG GCGCTGCTCG GCGCGCCGAA GGTGAAGGCG
ATCCGCGGCT TCTCCGACTT CGGCTTCAGC TACGTCTACG TCATCTTCGA GGACGGGACC
GACCTCTACT GGGCGCGCAC CCGCGTGCTC GAGTACCTCT CCAAGATCCA GCCGCAGCTC
CCGGCCGGCG TGAAGACCGA GCTCGGCCCG GACGCGACCG GCGTCGGCTG GATCTTCCAG
TACGCGCTTG TGGACCGCTC CGGGCAGCAC TCGTCGGACG AGCTCCGCTC CTACCAGGAC
TGGTTCCTGC GCTACTCCGT CCAGAGCGTG CCGGGCGTGT CGGAGGTCGC CACGGTGGGC
GGCCAGGTCC GGCAGTACCA GGTGACCGTC AACCCGAACG CGCTCGCCGC CTACAAGCTG
CCGCTCGACG CGGTGGTGCA GGCGGTCCGC GCCGGCAACA ACGACGTGGG CGGCCGCCTG
GTGGAGCTGG CGGGCCGGGA GTACATGGTT CGCGGCCGCG GCTACGTGAA GACCATCGCG
GACCTCGAGA ACATCGTGCT CAAGGCGGAG GGCGGCACGC CGGTCCTGGT GAAGGACGTG
GCCACGGTGG CGCTCGGCCC GGAGATGCGA CGCGGGGTGG CCGACCTCGA CGGCGAGGGC
GACGTGGTGG GCGGCATCGT GGTGATGCGC CACGGCGAGA ACGCCCTCAA CGTGATCCAC
CGCGTGAAGG CCAAGCTCGA GGAGGTGAAG CCGTCGCTGC CGAAGGGCGT CGAGGTGGTC
ACCACCTACG ATCGGTCCGA GCTCATCGAC CACGCCATCG AGACGGTGAC GCACAAGGTG
ATCGAGGAGG TGATCATCGT CTCGATCATC ATCCTCATCT TCCTGTGGCA CATCCCGTCG
GCGATCATCC CCATCGTCAC CATCCCGGTG TCGGTCGCGC TCTCGTTCAT CCCCATGTAC
CTGATGGGCC TGAACGCGAA CCTGATGTCG CTCTCCGGGA TCGCGATCTC GATCGGCGTG
CTGGTGGACG GCGCCATCGT CGAGGTCGAG AACGCCTACA ACAAGATCCA CCACTGGATA
CAGGACGGGA AGAAGGGCGA CTTCCACGAG GTCCGCCTCG AGGCGCTCCT CGAGGTCGGG
CCGGGGGTGT TCTTCTCGCT GCTCGTCATC GCGGTCGCGT TCATGCCGGT GTTCACCCTG
GTGGATCAAG AGGGACGGCT GTTCCGGCCG CTCGCGTACT CGAAGAACCT CGCCATGGCG
ATCGCGGCGC TGCTCGCGAT CACGCTCGAC CCGGCCATGC GCATGCTGTT CGCGCGCATC
GAGCCGTACA CCTTCCGGCC CCGCTTCGCC TCGGCGATCG CCACCCGCGT GCTGGTGGGC
AGGTACTACT CGGAGGAAGG CCACCCCATC TCGCGCGTCC TGCACCACCT GTACGAGCGC
CCCTGCCGCT TCGTGGTCCG CCACGCCAAG GCCACCATCG CGGTGAGCGC GCTGCTCGTG
CTCACCACCA TCCCGGTGTT CCGGCACCTC GGCTCGGAGT ACATGCCGCC GCTGCGCGAG
GGGACGATCC TCTACATGCC GAGCGCGGTC GAGCCGGGCA TGTCGGTGGC CGAGGCGCAG
AAGGCGCTGC AGGTGCAGGA CAAGATCCTG AAGACCTTCC CCGAGGTGGA GCGCGTCTTC
GGGAAGGCGG GCCGCGCCAA CACCTCCACC GACCCGGCGC CGTTCACCAT GATGGAGACG
ACCATCATCC TGAAGCCGGA GCGCGAGTGG CGCGAGCACC CGCGCTGGTA CTCGTCCTGG
GCGCCGGAGT GGCTGAAGGC GGGCCTGCGC CCGTTCTGGC GCGACCGGAT CTCGTACGAG
GAGCTCGAGC ACGAGATGGA CCAGGCGCTG CAGCTCCCCG GCATCTCGAA CGCCTGGACC
ATGCCGATCA AGGGGCGCAA CGACATGCTC TCGACCGGCA TCCGCACGCC CATCGGCATC
AAGGTGGCGG GCGCGGACCT GGCCGAGATC GAGAAGATCG GCCTCGACGT CGAGGCGGCG
CTCACCAAGG TGCCCGGCAC CCGCAGCGTC TACGCGGAGC GCGTGGCCGG CGGCTACTTC
CTCGACTTCG TGCTGAAGCG CGACCAGCTC GCCCGCTACG GGCTGAGCGT GGACGCCGCG
AACATGATGG TCATGACCGC GGTGGGCGGC GACAACCAGT CCACCACCGT GATGGGCCGC
GAGCGCTACG GCATCAACGT CCGCTACGCG CGCGACTACC GCGAGGACCT CCAGTCGCTC
CGGCGCGTGC TGCTGCCGCT GCCGGGCGGC CAGGGCCAGA TCCCCATGGA GGAGATCGCC
GACGTGGAGC TGGCGCAGGG CCCGTCGATG ATCCGCGACG AGAACGGCCT GCTGGCCGGC
TACGTCTTCG TGGACTTCGA CACCTCGAAG GTGGACGTGG GCAGCTACGT CGAGCAGGCG
AAGAAGGCGG TCGCGGCGGG CGTGAAGACG CCCACCGGCT ACTCGATGAC CTGGAGCGGC
CAGTACGAGA ACATGATGCG CGTGAACGAG CGGCTGAAGC TCATCCTGCC CATCACGCTC
GTGCTCATCT TCTTCCTGCT CTACATGAAC ACCCGGAGCA CCTTCAAGGC GAGCGTCATC
ATGCTGGCGG TGCCGTTCTC CGCCATCGGC GCCATCTGGC TGCTGTGGAT GCTCGACTAC
AACATGTCGA TCGCGGTCTG GGTCGGGCTC ATCGCGCTGA TGGGGCTCGA CGCCGAGACC
GGGGTGTTCA TGCTGCTGTT CCTCGACCTC TCCCACGACG AGTACAAGAA GAAGGGGCTG
CTGCGCACCG AGAGCGACCT GGTGGAGGCG ATCATCCACG GCGCGGTGAA GCGCGTGCGG
CCGAAGGCGA TGACCGTGCT CGCCGCCATG CTGGGCCTGC TGCCGATCAT GTGGTCCACC
GGCACCGGCG CGGATCTCAT GAAGCGCATC GCCGCGCCCA TGGTGGGCGG CCTGGTGACG
AGCTTCCTCC TCGAGCTGAC CGTGTACCCG GCCATCTACT TCCTCTGGAA GCGCAAGGAG
GTCGTGAAGG ACGGCCAGGC CACCCCGGCC ATCGCCGCCT GA
|
|---|
| Protein sequence | MIKAIIRFSA HNKYLVIAAT VVALVGAWWT MRNIPLDALP DQSDTQVIVY SQWDRSPDII
EDQVTYPITT ALLGAPKVKA IRGFSDFGFS YVYVIFEDGT DLYWARTRVL EYLSKIQPQL
PAGVKTELGP DATGVGWIFQ YALVDRSGQH SSDELRSYQD WFLRYSVQSV PGVSEVATVG
GQVRQYQVTV NPNALAAYKL PLDAVVQAVR AGNNDVGGRL VELAGREYMV RGRGYVKTIA
DLENIVLKAE GGTPVLVKDV ATVALGPEMR RGVADLDGEG DVVGGIVVMR HGENALNVIH
RVKAKLEEVK PSLPKGVEVV TTYDRSELID HAIETVTHKV IEEVIIVSII ILIFLWHIPS
AIIPIVTIPV SVALSFIPMY LMGLNANLMS LSGIAISIGV LVDGAIVEVE NAYNKIHHWI
QDGKKGDFHE VRLEALLEVG PGVFFSLLVI AVAFMPVFTL VDQEGRLFRP LAYSKNLAMA
IAALLAITLD PAMRMLFARI EPYTFRPRFA SAIATRVLVG RYYSEEGHPI SRVLHHLYER
PCRFVVRHAK ATIAVSALLV LTTIPVFRHL GSEYMPPLRE GTILYMPSAV EPGMSVAEAQ
KALQVQDKIL KTFPEVERVF GKAGRANTST DPAPFTMMET TIILKPEREW REHPRWYSSW
APEWLKAGLR PFWRDRISYE ELEHEMDQAL QLPGISNAWT MPIKGRNDML STGIRTPIGI
KVAGADLAEI EKIGLDVEAA LTKVPGTRSV YAERVAGGYF LDFVLKRDQL ARYGLSVDAA
NMMVMTAVGG DNQSTTVMGR ERYGINVRYA RDYREDLQSL RRVLLPLPGG QGQIPMEEIA
DVELAQGPSM IRDENGLLAG YVFVDFDTSK VDVGSYVEQA KKAVAAGVKT PTGYSMTWSG
QYENMMRVNE RLKLILPITL VLIFFLLYMN TRSTFKASVI MLAVPFSAIG AIWLLWMLDY
NMSIAVWVGL IALMGLDAET GVFMLLFLDL SHDEYKKKGL LRTESDLVEA IIHGAVKRVR
PKAMTVLAAM LGLLPIMWST GTGADLMKRI AAPMVGGLVT SFLLELTVYP AIYFLWKRKE
VVKDGQATPA IAA
|
|---|
| |