Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | A2cp1_4218 |
Symbol | |
ID | 7297872 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anaeromyxobacter dehalogenans 2CP-1 |
Kingdom | Bacteria |
Replicon accession | NC_011891 |
Strand | - |
Start bp | 4699412 |
End bp | 4700695 |
Gene Length | 1284 bp |
Protein Length | 427 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 643597024 |
Product | diaminopimelate decarboxylase |
Protein accession | YP_002494601 |
Protein GI | 220919297 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0019] Diaminopimelate decarboxylase |
TIGRFAM ID | [TIGR01048] diaminopimelate decarboxylase |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.15741 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACCACT TCCAGCGCAA GCGCGGCGTC CTGCACGCCG AGGCCGTCCC GGTGGAGGAG CTGGCGCGGG CGTACGGCAC GCCGCTCTAC GTCTACTCGA CCGCGACGCT CACCCGGCAC TGGAAGGTGC TGCACCGCTC GCTGGCCGGG CTCGACCACC TGGTGTGCTA CGCGGTGAAG GCGAACTCCA ACCTGGCGGT GCTGTCGCTG TTCGCGCGGC TCGGCTCCGG GTTCGACATC GTCTCGGGCG GCGAGCTGTA CCGCGTGCTC AAGGCGGGCG GCCACCCGGG CAAGGTGGTG TTCAGCGGGG TGGGCAAGCG CGACGACGAG GTCGCGTTCG CGCTCGAGTC CGGGGTGAAG GTGCTGAACG TGGAGAGCGC GCCGGAGCTG GCGCGGATCT CCATCGTCGC GCGGCGCATG GGGCTCCGCG CGCCGGTCGC GCTGCGGGTG AACCCGGACG TGGACCCGAA GACGCACCCG TACATCTCCA CCGGCCTCAG CGAGAACAAG TTCGGCGTGT CGGTGGACGA GGCGCGCCGG CTCTACGCGC TCGCCGCGCA GGATCCGGCG CTCGAGGTCC GCGGCGTCGC TTGCCACATC GGCTCGCAGA TCACCACGGT GCGTCCGTTC CTGGACGCCA TCGCGCGCGT CCTCTCGCTC GTGAAGGATC TCGGCAAGCA GGGGATCCGG CTCGGCCACG TCGACGTGGG CGGCGGCCTC GGCATCACCT ACGCCGACGA GGAGCCGCCT CACCCCGACG AGTACGGCCG GGCCATCAAG AAGGCGCTCT CGCGCTTCGA CGGCGAGGTG ATGCTCGAGC CCGGGCGCGT GCTGGTGGGG AACGCCGGCG TGCTCGTCAC CCGCGTGCTC CACGTGAAGG AGAGCGGTCG CAAGGTGTTC GTGGTGGTGG ACGCGGCCAT GAACGACCTG GTGCGGCCGA GCTACTACGA CGCGCACCAC GAGATCGAGC CGGCCGGCGC GCCGCGGAAG GACGCGGAGG AGATCGTCTG CGACGTGGTG GGCCCGATCT GCGAGTCCTC GGACTTCCTG GCGCGCAAGC GGCGCATGCC GCGGCCGGTC CGGGGCGACC TGCTGGTGGT CCGCTCGGCG GGCGCCTACG GGTTCGCCAT GTCCTCGAAC TACAACTCCC GCCCGCGCGC GGCCGAGGTC CTGGTGGACG GCGACGGCGC CCGGCTGGCG CGCCGGCGCG AGACCTATGC CGACCTCGTC CGCGGGGAGA CCCCCGAGCC CGAGGCCGAG CGGTTCCGCA CCCCGCGGCG ATGA
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Protein sequence | MNHFQRKRGV LHAEAVPVEE LARAYGTPLY VYSTATLTRH WKVLHRSLAG LDHLVCYAVK ANSNLAVLSL FARLGSGFDI VSGGELYRVL KAGGHPGKVV FSGVGKRDDE VAFALESGVK VLNVESAPEL ARISIVARRM GLRAPVALRV NPDVDPKTHP YISTGLSENK FGVSVDEARR LYALAAQDPA LEVRGVACHI GSQITTVRPF LDAIARVLSL VKDLGKQGIR LGHVDVGGGL GITYADEEPP HPDEYGRAIK KALSRFDGEV MLEPGRVLVG NAGVLVTRVL HVKESGRKVF VVVDAAMNDL VRPSYYDAHH EIEPAGAPRK DAEEIVCDVV GPICESSDFL ARKRRMPRPV RGDLLVVRSA GAYGFAMSSN YNSRPRAAEV LVDGDGARLA RRRETYADLV RGETPEPEAE RFRTPRR
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