Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | A2cp1_4217 |
Symbol | |
ID | 7297871 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anaeromyxobacter dehalogenans 2CP-1 |
Kingdom | Bacteria |
Replicon accession | NC_011891 |
Strand | - |
Start bp | 4698486 |
End bp | 4699373 |
Gene Length | 888 bp |
Protein Length | 295 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 643597023 |
Product | dihydrodipicolinate synthase |
Protein accession | YP_002494600 |
Protein GI | 220919296 |
COG category | [E] Amino acid transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0329] Dihydrodipicolinate synthase/N-acetylneuraminate lyase |
TIGRFAM ID | [TIGR00674] dihydrodipicolinate synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.00266238 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGACGAC TCGAAGGTTC GATGGTGGCC ATCGTCACCC CGATGAAGGA CGGCGCGGTG GACCTGCGCG CCCTCCGCGA CCTGACCGAG TGGCAGCTCG CCGAGGGGAC GGACGGCATC GTGCCGTGCG GCACCACCGG CGAGGGCGTG ACGCTCACCC CGGCCGAGCG GGCCGACGTG ATCCGGACCG TCATCGAGAC GGTGCGCGGC CGGGCGCTGG TCATCGCCGG CGCCGGCTCG AACGCGACGC ACGAGGCCAT CGAGTCGGTG AAGCTGGCGA AGACGCTCGG CGCCGACGCC GCGCTGGTGG TGACGCCCTA CTACAACAAG CCCACGCAGG AGGGGCTGTT CCGGCACTAC CAGGCGATCT GGGAGGCGAC GCGCTTCCCG GTGGTCGCCT ACAACGTGCC GTCGCGCACC TCGGTGGACC TGCTCCCCGA GACCGTGGCC CGGCTCGCGA AGGCGGGCGC CATCGCCGGC ATCAAGGAGG CGACCGCGAA CATGGACCGG CAGGTCCAGC TCGTCGAGAA GGTCGGCAAG GACGCGATCG CCTACCTCTC CGGCGACGAC TTCACGGTGC TGCCCTACAT CGCCTGCGGC GGCCACGGCG TCATCTCGGT GATCGCCAAC GTCGCGCCGC GCGCGATGAA GGAGCTGGTG GTGGCGGCGC GCTCGGGCGA CCTCGCCGGC GCGCTCGCGA AGCAGGCGGC CATGGCCGAG CTGAACCGGA TGATGTTCGT CGAGACCAAC CCCGGGCCGG TGAAGGCCGC GGTGGCGCTG CTCGGCCGCT CGGGCGGCGA GCTGCGCCTG CCGCTCGCGC CGGTGTCGGA GGCGAGCCTC GCCAAGGTGC GCGACGCGAT GGTGCGCTTC GGGCTGAAGC TCGCCTGA
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Protein sequence | MRRLEGSMVA IVTPMKDGAV DLRALRDLTE WQLAEGTDGI VPCGTTGEGV TLTPAERADV IRTVIETVRG RALVIAGAGS NATHEAIESV KLAKTLGADA ALVVTPYYNK PTQEGLFRHY QAIWEATRFP VVAYNVPSRT SVDLLPETVA RLAKAGAIAG IKEATANMDR QVQLVEKVGK DAIAYLSGDD FTVLPYIACG GHGVISVIAN VAPRAMKELV VAARSGDLAG ALAKQAAMAE LNRMMFVETN PGPVKAAVAL LGRSGGELRL PLAPVSEASL AKVRDAMVRF GLKLA
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