Gene A2cp1_4117 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagA2cp1_4117 
Symbol 
ID7297542 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaeromyxobacter dehalogenans 2CP-1 
KingdomBacteria 
Replicon accessionNC_011891 
Strand- 
Start bp4603161 
End bp4603796 
Gene Length636 bp 
Protein Length211 aa 
Translation table11 
GC content75% 
IMG OID643596924 
ProductUracil-DNA glycosylase superfamily 
Protein accessionYP_002494501 
Protein GI220919197 
COG category[L] Replication, recombination and repair 
COG ID[COG1573] Uracil-DNA glycosylase 
TIGRFAM ID[TIGR00758] uracil-DNA glycosylase, family 4 


Plasmid Coverage information

Num covering plasmid clones7 
Plasmid unclonability p-value0.00101771 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCCGCGCC CCCCGAAGAC CGTCACCGCG CTCGAGGCGG TGCTCCGCGA CGTGGCGGCG 
TTCCGGCCGC GCGGCTTCGG CCCGCCGATC CACGGGCCGC CGGTGCCGAG CCGGATCTTC 
CTCATCGGCC AGGCGCCCGG GCCGCACGAG GCGCGCTTCG GCCGCCCGTT CGCGTGGACC 
GCCGGCAAGA CGCTGTTCCG CTGGCTGGAG CGCGCCACCG GCGCCGGCGA GGACCTGGTC 
CGCGAGCGCG TCTACATCTC CGCCGTGGTG CGATGCTTCC CCGGAAAGGC GCCGGGCGGC 
GGCGACCGCG TGCCCACGCC CGACGAGTGC GCGCTGTGGC GGGGCTTCGT CCGGCGGGAG 
GTGGAGATCC TCCGGCCTCG GCTCGTGATC CCGGTCGGTC GCCTCGCCAT CCAGGAGGTG 
CTCGGCCGCA CGGAGCCCAT CGCGGCCGTG GTCGGGCGCA CGCTCCGTGC GTACTTCCAC 
GGCGTGAAGA CCGACGTCAT CCCGCTGCCG CACCCGTCGG GTGCCTCGAC CTGGTTCAAG 
ATGGAGCCGG GCAAGACGCT GCTCGACGAG GCGCTGACGC TCATCGCCGA TCACCCGGAG 
GTCCAGCGCA CCTTCCGAGG GAGGCGCACC GCGTGA
 
Protein sequence
MPRPPKTVTA LEAVLRDVAA FRPRGFGPPI HGPPVPSRIF LIGQAPGPHE ARFGRPFAWT 
AGKTLFRWLE RATGAGEDLV RERVYISAVV RCFPGKAPGG GDRVPTPDEC ALWRGFVRRE 
VEILRPRLVI PVGRLAIQEV LGRTEPIAAV VGRTLRAYFH GVKTDVIPLP HPSGASTWFK 
MEPGKTLLDE ALTLIADHPE VQRTFRGRRT A