Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | A2cp1_4115 |
Symbol | |
ID | 7297540 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anaeromyxobacter dehalogenans 2CP-1 |
Kingdom | Bacteria |
Replicon accession | NC_011891 |
Strand | + |
Start bp | 4602059 |
End bp | 4602733 |
Gene Length | 675 bp |
Protein Length | 224 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 643596922 |
Product | Ribulose-phosphate 3-epimerase |
Protein accession | YP_002494499 |
Protein GI | 220919195 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0036] Pentose-5-phosphate-3-epimerase |
TIGRFAM ID | [TIGR01163] ribulose-phosphate 3-epimerase |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0155127 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCCCTGC CCATCCGCAT CGCCCCGTCG ATCCTCTCCG CCGACTTCGG CCGGCTCGCC GAGGAGGTCC GCGCGGTCGA GGCCGCCGGC GCCGACGTGA TCCACGTGGA CGTGATGGAC GGGCGGTTCG TGCCGAACAT CACCATCGGC CCGCTGGTGG TGGAGGCGGT GCGCAAGGTC ACGAAGCTCC CGGTGGACGC GCACCTCATG ATCGTCGAGC CGGAGAAGTA CGTGGAGGCG TTCGCGAAGG CGGGCGCCGA CCTGGTCTCG GTGCACGCCG AGGTCTCGCC GCACCTCCAC CGCACGCTGC AGGCCATCCG CGCCGCGGGC GCGCGCCCGG CGGTGGCGCT CAACCCGTCC ACCGACCTCA CCGCCGTCGA GTACGTGCTC GGCGACTGCG AGATGGTGCT CGTCATGACC GTCAACCCGG GCTTCGGCGG GCAGAAGTAC ATCGAGGCCT GCACCGAGAA GGTCCGCCGC CTGCGGGCCA TGGCGGACGC GCGCGGGCTG GCGCTCGAGA TCGAGGTCGA CGGCGGCGTG AAGCCGGAGA CCGCCGCCAA GGTCGCGGCG GCGGGCGCGA ACGTGCTCGT CGCCGGCACG GCCGTGTTCG GTGCGCCGGA CTACCGCCAG GCCATCGCGG GCATCCGCGC CGCCGCGGAG CGCGGCCGCG GCTAG
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Protein sequence | MPLPIRIAPS ILSADFGRLA EEVRAVEAAG ADVIHVDVMD GRFVPNITIG PLVVEAVRKV TKLPVDAHLM IVEPEKYVEA FAKAGADLVS VHAEVSPHLH RTLQAIRAAG ARPAVALNPS TDLTAVEYVL GDCEMVLVMT VNPGFGGQKY IEACTEKVRR LRAMADARGL ALEIEVDGGV KPETAAKVAA AGANVLVAGT AVFGAPDYRQ AIAGIRAAAE RGRG
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