Gene A2cp1_4005 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagA2cp1_4005 
Symbol 
ID7297347 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaeromyxobacter dehalogenans 2CP-1 
KingdomBacteria 
Replicon accessionNC_011891 
Strand
Start bp4463728 
End bp4464573 
Gene Length846 bp 
Protein Length281 aa 
Translation table11 
GC content67% 
IMG OID643596815 
ProductIntegrase catalytic region 
Protein accessionYP_002494392 
Protein GI220919088 
COG category[L] Replication, recombination and repair 
COG ID[COG2801] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.795108 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTAGGGC CCGCCGCGCT TCGCCCGGCG GTAATCGAGC TGGGGGCGAA GTTCGCGATG 
AAGAAGCGTC GGGCCTGTCG CGTCGTCGGG CTCGCGCCGT CGACGCTCTA CTACTGCAGC
CGCCGGCCGG AGCGCGCCGA AGTCCGGGCA CGCCTGCGGG ATCTAGCCGC CCAGCGTCCG
CGCTGGGGCT ACCGGCGCCT GCATGTGCTC CTCGACCGCG AAGGGCACCA CCTGAACCAC
AAGCTCGTGT TCCGGCTGTA CCGCTCGGAG GGGCTGGCTG TCAGGCGAAA GAGGCGGAAG
CGGATCACGT CGTCACTGCG CGTGGTTCCA CCGCCGCCGA CGCGCCCGCG CCAGCAGTGG
ACGATGGACT TCACGCAGGA CTCGCTCGCA AGCGGACGCC AGTTCCGGAC CCTGAACTTG
ATCGACGCCT TCACCCGCGA GTGCCTGCTC ATCGAGGCCG ACCACTCGCT CACCGGGGCG
CGCGTCGTGC GCGCGCTGGA GCGCCTCCGC GAGCTCCACG GCACGCCCGA GGTCATCCGC
ATCGACAACG GGACGGAGTT CACGAGCAGC GCGGTGGACG CCTGGGCCTA TACCAATCAG
GTCCGCCTGG ACTTCATCAC GCCGGGCAAG CCGACCGAGA ACGGGCACAT CGAGAGCTTC
AACGGGAAGT TCCGCGACGA GTGCCTGAAC GAGAACTGGT TCATCAGCCT CGATGACGTC
CGTCGCAAGG TCGAGGCGTA TCGAGTCGAC TACAACGAGG TCAGGCCGCA CAGTTCGCTG
GACAACAGGA CGCCAAACGA GTTGGCTCAC AGTCTCACCG GACTGGCATC ATCAGCCGCC
CAGTGA
 
Protein sequence
MVGPAALRPA VIELGAKFAM KKRRACRVVG LAPSTLYYCS RRPERAEVRA RLRDLAAQRP 
RWGYRRLHVL LDREGHHLNH KLVFRLYRSE GLAVRRKRRK RITSSLRVVP PPPTRPRQQW
TMDFTQDSLA SGRQFRTLNL IDAFTRECLL IEADHSLTGA RVVRALERLR ELHGTPEVIR
IDNGTEFTSS AVDAWAYTNQ VRLDFITPGK PTENGHIESF NGKFRDECLN ENWFISLDDV
RRKVEAYRVD YNEVRPHSSL DNRTPNELAH SLTGLASSAA Q