Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | A2cp1_3939 |
Symbol | |
ID | 7297279 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anaeromyxobacter dehalogenans 2CP-1 |
Kingdom | Bacteria |
Replicon accession | NC_011891 |
Strand | + |
Start bp | 4380571 |
End bp | 4383792 |
Gene Length | 3222 bp |
Protein Length | 1073 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 643596748 |
Product | carboxyl-terminal protease |
Protein accession | YP_002494328 |
Protein GI | 220919024 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0793] Periplasmic protease |
TIGRFAM ID | [TIGR00225] C-terminal peptidase (prc) |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.0122378 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATCCGCC CCTTCCGGCT GTTCGCCACC CTGGCGGCCT CGCTCGCGCT CGCGCTCGGC GTCACGGCCC GCTTCGTCCG CGCCGAGCCC GAGGCGCCTC CGCCGGCCGT CGCGTTCAAG GGCGCCGCGC CGGTGCCGGC GCGCGCCGGC GGCAACGGCG ACTACCAGCT CGAGCGGCTG CCCATCCTGT CGAGGGTGAT CCTCCAGGTG AAGGACAACT ACGTGGACCC GGGCCGCGTG GATCCGAAGG GCATGGTGGT CGCGGCGCTC GAGGCGGTGG AGAAGACCGT CGCCGAGGTG ATGGTGCAGG GCGACGAGAA GTCGCCCCGG CTCACGCTCA CGGTGGGCAG CGCCTCCCGC GAGCTCGACA TCTCCGGCGT GAAGAGCATC TGGGAGATCC GCACCGTCCT CGGCGAGGCG ATGGGCTTCA TCCAGCAGCA CCTCGTCGCC CACAAGGACC TGCGCGAGAT CGAGTACGCC GCGGTGAACG GCCTGCTCCA GACGCTCGAC CCGCACACCG TCCTGTTCGA CCCGAAGTCG TTCAAGGAGA TGAAGCTGCA GACCCGCGGC GAGTTCGGCG GGCTCGGGTT CGTGGTGGCG ATGCGCGACA GCAACCTGAC CGTGGTCCGG GTGCTCCGGA ACACGCCGGC GCAGCGCGCC GGGGTGAAGC CGAAGGACGT GATCGCGCGC ATCGAGGAGC AGTCCACCGT CAACATGGAC CTGCAGGACG CGGTGGACCG CCTCCGCGGT CGGCCGCAGA GCAAGGTGGC CATCACCATC CAGCGCCCGA CCCAGGAGCC GCGGCGGATG GTGCTGACCC GCGAGGTGAT CAGCATCGAG ACGGTGCCGC AGGCGCAGCT CCTCGACGGC AACGTCGGCT ACGTCAAGCT CACCCAGTTC TCCACCAACA GCACCCGCGA CCTGGTGCAG GCGCTCCAGC AGCAGCGCGC GCAGGCCGGC GGCAAGCTGC AGGGCCTGGT GCTCGATCTC CGCGGCAACC CGGGCGGCCT GCTCGACCAG GCCATCTCGG TCTCCGACCT GTTCCTCTCG GAGGGCGTGA TCGTCAAGAC GGTGGGCGAG GGCGACAAGC AGCAGATCCA CGAGGTGAAG GAGGCGAGCG CCGAGCCCTC CGACCTCACC GGCCTGCCCA TCGTCGTCAT CGTCAACAAC AGCACCGCCT CCGCCAGCGA GATCGTCGCC GGCGCGCTCA AGAACAACGG GCGCGCGCTG GTGATCGGCC GCCAGAGCTT CGGCAAGGGC TCGGTGCAGG TGCTCTACGA CTTCAGCGAC CCGAGCCGCC CCGCCGACGA GGCCGCGCTC AAGCTCACCA TCGCGCAGTA CCTCACCCCG GGTGACGTCT CCATCCAGGA GGTGGGCATC ACGCCGGACG TGCTGCTGCT GCCGGGCCGC GCGCTGAAGG AGCAGGTCAA CTACTTCGCC CCGCCGCGCT CGATGGGCGA GGCCGACCTC GACCGCCACC TCACCAACCC GGCCGACCGC ACCGTCCCCG AGGCGGCCCG CGCCGAGGCG CGCAAGAAGC GCCAGGACAA GCCGCCGCTC GAGCTGCGCT ACCTGCTCGA CGAGAAGGAG GACCTGGTCG CGAAGCAGCT GAAGAAGGAC GCGGCCGCCG AGGCCTCCCC GCACGGCGAC GTGACCGAGC TGACGCCGGA GCAGCAGGAG GACGAGGACG CCGACGCCGA TCCGGATCGC TTCGTCGAGG ACTACCAGAT CCGCTTCGCG AAGGACCTGC TGCGCCGCGC GCCCTACCCG GATCGCGCCC GCCAGCTCGA GGCCGCCAAG GCGCTCGTGT CCGAGCGGCA CCAGCAGGAG GAGACGCGGC TGCAGAAGCG CCTCGCCGAG CTGGGCGTCG ACTGGGCCGA CGGCCAGGCC AGCCGCGGCA ACCCGCGCGC GGTGGTGACG GTGTCGCCGC CGCCGGGCAA GGAGCTGCGC GCCGGCGAGA CGATGCCCTG GACCGTGACG GTCGAGAACC GCGGCGACGC GCCGTTCCGG CGCCTCCGCG CCTGGACCAC CGCCGACAAG AACGGGCTGC TCGACCGCCG CGAGTTCGTG TTCGGCGCGG TGCGCCCGGG CGAGAAGCGC ACCTGGACGG CCCCGGTGAA GCTGCCGAAG GGCATGGACA CCCGCCGCGA CGAGGTGACG CTCCACTTCG AGGACGAGGG CGGCAAGGCG CCGCCGGACG TCACCACGGC GGTGGCGGTC ACCGAGGTGC AGAAGCCGGT GTTCGCGTTC AGCGCCCAGG TGGACGACGC CAAGGGCGGC AACGGCGACG GGCTCCCGCA GCGGGGCGAG ACGTTCAACC TCCGGGTGGA CGTGCGCAAC GCCGGCCCGG GCGTCTCGGG CGACAAGACC TACGTGCTGC TGAAGAACCT CGGGGACGAG AAGCTCTTCA TCAAGAAGGG GCGCGAGGTG ATCGGCGCGC TCAAGCCGGG CGAGGTGAAG ACCGCCACCA TGGAGGTCGA GCTCCGCCGC GGCTCGAAGA GCGACACCTC GCCGGTCCGC GTCACCATCG TGGACGAGAA GATGGACGAG TACGTCTCCG AGAAGCTCGA CCTGCCGGTG GCGACGGACG AGCCGGCCCG CACCGCCGCG CACGGCGCGG TGCGCGTGGA GGTCGCGGAC GCCCAGCTCC GCACCGGCGC GAGCGCCACC GCCCCGGTGA TCGCGGCCGC GCGCAAGGGC GCGGTGCTGC CGGTGGACGC CCGCTTCGGC GAGTTCTACC GGGTCGAGTG GCAGAAGGGG CGCTACGCGT TCGCCGCCGA GGGCGAGGTG AAGCCGCTGA AGGCGGCCGG GACGGCGCGG AGCGGCGCCG TGGTCGAGGT GTGGCAGCGC GAGCCGCCGC GCATCGCGTT CTCGCCCGAC CCGCTGAAGG GCGCGCCGGT GGTGGACGGC AACACCTTCA AGCTCCAGGG CACCGCCAGC GTGCCGCCCT CGGCGGATCC GACGGCGCGC CTGCGCGACG TGTTCGTGTT CGTGAACGAG CAGAAGGTCT TCTTCAAGGT CCAGCCGGAC ACGGCCACCT CCTCGAAGAT GGACTTCACC GCCGACCTGC CGCTCAAGCC CGGCAACAAC GTCGTCACCG TGTTCGCCCG CGAGGACGAC GAGTTCCAGA GCCGCCGGAG CGTGGTGGTG TTCCGCCGCA CGCCGCCGGA GGTCGCGGCC GAGGCCGGGC GCGGGCAGGC GCAGCGGAGC AGCGGGCAGT AG
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Protein sequence | MIRPFRLFAT LAASLALALG VTARFVRAEP EAPPPAVAFK GAAPVPARAG GNGDYQLERL PILSRVILQV KDNYVDPGRV DPKGMVVAAL EAVEKTVAEV MVQGDEKSPR LTLTVGSASR ELDISGVKSI WEIRTVLGEA MGFIQQHLVA HKDLREIEYA AVNGLLQTLD PHTVLFDPKS FKEMKLQTRG EFGGLGFVVA MRDSNLTVVR VLRNTPAQRA GVKPKDVIAR IEEQSTVNMD LQDAVDRLRG RPQSKVAITI QRPTQEPRRM VLTREVISIE TVPQAQLLDG NVGYVKLTQF STNSTRDLVQ ALQQQRAQAG GKLQGLVLDL RGNPGGLLDQ AISVSDLFLS EGVIVKTVGE GDKQQIHEVK EASAEPSDLT GLPIVVIVNN STASASEIVA GALKNNGRAL VIGRQSFGKG SVQVLYDFSD PSRPADEAAL KLTIAQYLTP GDVSIQEVGI TPDVLLLPGR ALKEQVNYFA PPRSMGEADL DRHLTNPADR TVPEAARAEA RKKRQDKPPL ELRYLLDEKE DLVAKQLKKD AAAEASPHGD VTELTPEQQE DEDADADPDR FVEDYQIRFA KDLLRRAPYP DRARQLEAAK ALVSERHQQE ETRLQKRLAE LGVDWADGQA SRGNPRAVVT VSPPPGKELR AGETMPWTVT VENRGDAPFR RLRAWTTADK NGLLDRREFV FGAVRPGEKR TWTAPVKLPK GMDTRRDEVT LHFEDEGGKA PPDVTTAVAV TEVQKPVFAF SAQVDDAKGG NGDGLPQRGE TFNLRVDVRN AGPGVSGDKT YVLLKNLGDE KLFIKKGREV IGALKPGEVK TATMEVELRR GSKSDTSPVR VTIVDEKMDE YVSEKLDLPV ATDEPARTAA HGAVRVEVAD AQLRTGASAT APVIAAARKG AVLPVDARFG EFYRVEWQKG RYAFAAEGEV KPLKAAGTAR SGAVVEVWQR EPPRIAFSPD PLKGAPVVDG NTFKLQGTAS VPPSADPTAR LRDVFVFVNE QKVFFKVQPD TATSSKMDFT ADLPLKPGNN VVTVFAREDD EFQSRRSVVV FRRTPPEVAA EAGRGQAQRS SGQ
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