Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | A2cp1_3932 |
Symbol | |
ID | 7297272 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anaeromyxobacter dehalogenans 2CP-1 |
Kingdom | Bacteria |
Replicon accession | NC_011891 |
Strand | - |
Start bp | 4373154 |
End bp | 4374875 |
Gene Length | 1722 bp |
Protein Length | 573 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 643596741 |
Product | Lytic transglycosylase catalytic |
Protein accession | YP_002494321 |
Protein GI | 220919017 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1388] FOG: LysM repeat |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGGCAGA TCCGCACGAC CTTCCTAGCC GTTTGCGCGC TCGCCCTGGC CGGGCCGGCC AGCCCCCAGG GCCCCGCCTC CCGGGGCGTC ACCGTCCAGG CCGCCGCCCA GGCCCTGCCC GCCGCGGAGG TGCCGGAGGC GCAGATCGTG GCGCCGCCGA AGCCGGCGCA GCGCCGCCAG GAGCCGTCGG TGCAGGACGC GATCGCGAAC GCGGACGCGC CCGACGAGCC CGCCATCGCG GAGGAGATCG AGCAGGAGTC GGCGGAGCTG GAGGACCTGC GCCAGGCCGA GGAGGCGTCG CGGGTGCAGG ACGGCGCCGA GGGCCGCCGG ACGGTGGGCG CCGACGGGCT CGGGCTCGAG TCCCCCATCC GCGACCGCGT GGAGGGCGCG CTGGGCCGCG ACGCCACGCC GCGGGGCGAG GGCGCCGGGC GGATCCCGCT GCTCCCCGAG ATCGACCACG ATCTCGCCAC GCTCCAGGCC GAGTACGACA TCCCCATCGA CGTGAACGAG GCGGTGGTCG CGTACGTCCG CTTCTTCCAG TCGCCCAGCG TCCGCGCCCA CTTCGTGAAG TGGCTCGGGC GCTCGCACCG GTACATGGAG CGGTACCGCA AGATCCTGAA GGACGAGGGG CTGCCGCAGG ACACGGTCTT CCTCGCGATG ATCGAGAGCG GCTTCGGCAA CTTCGCCTAC AGCCGCGCCA AGGCGTCCGG CCCCTGGCAG TTCATCGCCG CGACGGGCAA GAGCTACGGC CTGAAGCAGG ACTTCTGGGT GGACGAGCGG CGCGATCCGG AGCGCTCCGC CCGCGCCGCC GCGCGCTTCC TGAAGCGGCT GCGCGAGCAG ACCGGCGACT GGCGGCTGGC GTGGGCCGGC TACAACGCCG GCGCCGGCCG CGTCCTCGCC GCGCAGCGGA TGGGGTACGA CGACTTCTGG GAGATGGCGG ACGTCCCCGG CAAGAAGGTG CTCCGCGCCG AGACCAAGGG CTACGTGCCG AAGCTGATGG CGGCCGCCAT CATCACCAAG CACCACGAGG CGTTCGGGTT CCGGCAGGAG GAGATCGAGC GGCAGGCGTG GACGGAGTAC GAGGAGGTGG ACGTCCCGGA CGCCACGCTG CTCACCGTCA TCGCGCGCGC CGCCGGCGTC TCCGAGAAGG AGATCATCGA CCTCAACCCC GAGCTGCGCC GCGCCTGCAC GCCGCCCCGC CCGTACAGGA TCAAGATCCC CGCCGAGCGC GCCGAGGCGT TCGCCGAGGC GTGGCCGGCG CTCCGCGCGA AGACCCGCCT GACGTTCGCC GGGCACGTGG TCCGCCGCGG CGACAGCATC GGCCGGATCG CGCAGCGCTA CGGCGTGCCG GCCCAGGGCA TCCTGGAGAT GAACGGCCTG AAGAGCGCGC GGAAGCTGCG CGTCGGCACG GAGCTGATCA TCCCGCGGCC CGCCGCCGGG GTGGCGGTGG CCGCGCGCGC GCCGGAGCCC GAGGCGCGCC GCCCGGCCGC CGCCGAGCGC GCCGCCGCCC AGGCGCCGGT GCGGACCGCC TCCGCCGCCG CGCCCGCCGC GAAGCCCGCG CACCAGACGC TGCGGGTCCG CGCCGGCGAC ACGCTCTGGT CCATCGCGCA GCGCTTCGGC GTCGAGCTCC AGGACCTGTG CCGCTGGAAC GGGATCAAGA ACCCCCGCAG CCACAAGCTG CTGGTGGGCG CGATGATCGT CGTGCGGCCC GGGCGCGGGT AG
|
Protein sequence | MRQIRTTFLA VCALALAGPA SPQGPASRGV TVQAAAQALP AAEVPEAQIV APPKPAQRRQ EPSVQDAIAN ADAPDEPAIA EEIEQESAEL EDLRQAEEAS RVQDGAEGRR TVGADGLGLE SPIRDRVEGA LGRDATPRGE GAGRIPLLPE IDHDLATLQA EYDIPIDVNE AVVAYVRFFQ SPSVRAHFVK WLGRSHRYME RYRKILKDEG LPQDTVFLAM IESGFGNFAY SRAKASGPWQ FIAATGKSYG LKQDFWVDER RDPERSARAA ARFLKRLREQ TGDWRLAWAG YNAGAGRVLA AQRMGYDDFW EMADVPGKKV LRAETKGYVP KLMAAAIITK HHEAFGFRQE EIERQAWTEY EEVDVPDATL LTVIARAAGV SEKEIIDLNP ELRRACTPPR PYRIKIPAER AEAFAEAWPA LRAKTRLTFA GHVVRRGDSI GRIAQRYGVP AQGILEMNGL KSARKLRVGT ELIIPRPAAG VAVAARAPEP EARRPAAAER AAAQAPVRTA SAAAPAAKPA HQTLRVRAGD TLWSIAQRFG VELQDLCRWN GIKNPRSHKL LVGAMIVVRP GRG
|
| |