Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | A2cp1_3876 |
Symbol | |
ID | 7297133 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anaeromyxobacter dehalogenans 2CP-1 |
Kingdom | Bacteria |
Replicon accession | NC_011891 |
Strand | + |
Start bp | 4313700 |
End bp | 4314392 |
Gene Length | 693 bp |
Protein Length | 230 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 643596685 |
Product | RNA polymerase, sigma-24 subunit, ECF subfamily |
Protein accession | YP_002494265 |
Protein GI | 220918961 |
COG category | [K] Transcription |
COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0338517 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCGGCCG CGCTAGTGTT CGCTCGAAGC GTCGTTCGAT GGTCGAAGGG GGATCCCATC GCTCGCCTGG CCCAGAGACT CGCGCTCGCC GCTCCCGTGA CGCCGCAGGC CGAGGCGGAC GTCCTCGACC TCGCCGAGCT CGCGGATCGC GACGCGGTCG AGCGCACCCT CGCCGGCGAC ACCGACGCGT TCGCGGGCGT GGTCCGCCGC CACGCCGGCG GCCTGGTCGG CATGTGCAGC CGCATGGTGA GCGACCCGCG CCTGGGCGAG GAGCTCGCGC AGGAGGCGTT CGCGCGCGCC TACACGCGGC TCGCCTCGTT CCGCGGCGAC TGCCGCTTCC GCCACTGGCT CTACCGCATC GCCGTGAACG GCTGCCGCGA CTGGCTGAAG GCCGGGGCGC GGGCGGAGCG CGCCAGCGAC CTCTCCGGCG ACGAGCTGGT CAGCGCGGTG GACCCGGAGC GCGACGCCGC CGCCCGGCAG GCGCTGCTCG CGCTGCAGGG CGCGCTCGCC GCGCTCCCGG CCAAGTACCG CGAGGCGTTC ACGCTGTTCC ACGTCGAGAA CCTTCCCTAC GAGGAGATCG AGGCGGCCAC CGGCGTGCGC GTCAACGCGC TGAAGGTGCG CGTGCACCGC GCGCGCCTGA TGCTGCGCGA GCGCCTCGGC GACCTGCTCG ATCCCGACGA GGTGACGCCG TGA
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Protein sequence | MAAALVFARS VVRWSKGDPI ARLAQRLALA APVTPQAEAD VLDLAELADR DAVERTLAGD TDAFAGVVRR HAGGLVGMCS RMVSDPRLGE ELAQEAFARA YTRLASFRGD CRFRHWLYRI AVNGCRDWLK AGARAERASD LSGDELVSAV DPERDAAARQ ALLALQGALA ALPAKYREAF TLFHVENLPY EEIEAATGVR VNALKVRVHR ARLMLRERLG DLLDPDEVTP
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