| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | A2cp1_3392 |
|---|
| Symbol | |
|---|
| ID | 7297406 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaeromyxobacter dehalogenans 2CP-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011891 |
|---|
| Strand | - |
|---|
| Start bp | 3781879 |
|---|
| End bp | 3783180 |
|---|
| Gene Length | 1302 bp |
|---|
| Protein Length | 433 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 643596199 |
|---|
| Product | protein of unknown function DUF190 |
|---|
| Protein accession | YP_002493790 |
|---|
| Protein GI | 220918486 |
|---|
| COG category | [S] Function unknown
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG1993] Uncharacterized conserved protein
[COG3448] CBS-domain-containing membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAGACGC TCGGAAAGGC GAAGCGGGTC CGCATCTACG TGAGCGAGGA CGACCGGGCG
GACGGAAAGC CGCTCCACCT CGCGATCCTG GAGCTCCTCC GTCGGGAGAG CGCCCAGGGA
GCGACCGTCC TGAAGGGCGT CGAGGGCTTC GGCGCGACGG GCCGGATCCA CGTCAGCAGC
CTCGTCGACG TCGCCTGGCG CCTGCCCCTC GTGATCGAGT GGGTCGATCG CCCGGAGCAG
GTCGAGCGGC TCGCGCCCCG CCTCCGCGCG CTCGTTCGCC ACGGCCTCAT CACCGTGGAC
GACACGGACG TGCTCCTGTT CGAGCCGCAC CCGGTCCGGG ATCTCACCAC GACGGCGATC
GTCGCCGACG TGATGAGCCG GGACGTCGTG ACGGTGGCGC GCTCGACACC GGTGCGCGAG
GTCGTGGAGC TCACGCTCGG CAAGACGTAC CGCGCGGTCC CGGTGGTCGA GGGCGGTCGG
CCGGTCGGCA TCGTCACCAG CAGCGACCTC GTCCACCGCG GCGGGCTCGG CGTCCGGCTC
GACCTGCTGG CGACGCTCGA CAGGCCCGCG CTCCAGGAGC TCCTCGAGCG CCTGACCCAG
CAGCGACGGA CGGCGGCAGA GGTGATGACG CCCGACCCCG TGACGGTGAG GTCGTCCGCC
TCGCTCCCCG CGGCGGCGGA GCGCATGGCT CGTCGCAGGC TGAAGCGCCT CCCGGTGGTG
GACGAGGCCG GGTCGCTCGT CGGAATCGTG AGCCGGGTGG ACCTGCTCCG CACGGTCGGC
GTCGGGTTCG GCAAGAAGGA GCCGATCGCA CGCGAGCTGG GACTCGCCGG CGACGTGCCG
CTCTCGCGGG TGATGCGCCG CGACGTCCCG GCCATCCATC CTGAGTCACC GCTGCCCGAG
GTGTTCCAGG CCGTCACCTC CACCCGCCTG AACCGCGCGC TGGTGCTGGA CGACGAGCGG
CGACCGGTCG GGCTCGTCAC GGATGCCGAG CTCCTCGAGC GTGTGACGCC GGCGCTGCGC
CCGGGCGCGA TCCGGGCGAT CATGCAGCGG CTCCCGTTCC GGCACGCGAG GGGCGAGGAG
TCGGTCGCCG CGCACACGCG AGGTGGCACG GCGGCCGACG TGATGAGCCG CCACGTGGCG
ACGGCCCGGG AGCACGCGCT GCTCTCGGAG GCCATCGCGA GCATGCTGCA GGGCGACGAC
AAGGTCCTCG CGGTCACGGA CGCCGACGGG CGCGTCGTCG GGATCGTGGA CAGGGCCGAT
CTGCTCCACG GGCTCACCGG ACCAGCCGCT CAGGAGGCCT AG
|
|---|
| Protein sequence | METLGKAKRV RIYVSEDDRA DGKPLHLAIL ELLRRESAQG ATVLKGVEGF GATGRIHVSS
LVDVAWRLPL VIEWVDRPEQ VERLAPRLRA LVRHGLITVD DTDVLLFEPH PVRDLTTTAI
VADVMSRDVV TVARSTPVRE VVELTLGKTY RAVPVVEGGR PVGIVTSSDL VHRGGLGVRL
DLLATLDRPA LQELLERLTQ QRRTAAEVMT PDPVTVRSSA SLPAAAERMA RRRLKRLPVV
DEAGSLVGIV SRVDLLRTVG VGFGKKEPIA RELGLAGDVP LSRVMRRDVP AIHPESPLPE
VFQAVTSTRL NRALVLDDER RPVGLVTDAE LLERVTPALR PGAIRAIMQR LPFRHARGEE
SVAAHTRGGT AADVMSRHVA TAREHALLSE AIASMLQGDD KVLAVTDADG RVVGIVDRAD
LLHGLTGPAA QEA
|
|---|
| |