| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | A2cp1_3137 |
|---|
| Symbol | |
|---|
| ID | 7298133 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaeromyxobacter dehalogenans 2CP-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011891 |
|---|
| Strand | - |
|---|
| Start bp | 3467940 |
|---|
| End bp | 3469349 |
|---|
| Gene Length | 1410 bp |
|---|
| Protein Length | 469 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 80% |
|---|
| IMG OID | 643595947 |
|---|
| Product | histidine kinase |
|---|
| Protein accession | YP_002493538 |
|---|
| Protein GI | 220918234 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0642] Signal transduction histidine kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.00554367 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAGCGGCG GCGCCGGGGG CGGCGGCCCG TCCCGGCTCG GGCTGCGCAT CTACCTCGTC
ACGGTCGTGG CGGTGCTCGC GACCGGCGTC GCGGTGCTCC TCGCGCTCGC GCTCGCGCGG
GACCGCCGCG AGCCGGTCCG GCGGGACGTC ATGCACGCGG TCGCCCGCGA CGCCGCGGCG
CGGGTGGCGA CGCAGTGGGG CTCGGCCGGC GCCATCCAGG AGGTGATCGG GCCGCTCGCC
TCGGCGCTGC GCGTGAGCGT CGCCGTGTAC GGCGCCGGAG GCGAGCCGGT GGCGAGCGCC
GGCGAGGCGA TGCGCCCGCC GCTCCCACCG CCGCCGGAGC GCGAGCGGTT CACGGACCGC
CTCGGGCCCG GGCCGCCCGG CGCGGGAGGA CGGGAGCGGC ACGTGGTGTC GGCGGTCGCG
CCCGTGGTCG TCGCCGGCGC GCCGGTGGGG TTCCTCGTCG TCGCGCAGCA GGTCCCGGGC
GGTCGCCCGC CGCCCGTCCT GCTCGTCCTC GTCGCGCTGG CGCTGGTCGG CGCGGGCGTC
GCGGCGGTGG TGCTGGGCGG CTCGCTCGCG CGGCCGCTCG ACCGGCTGGC GCGCACCGCC
CGCGCGCTCG GCGCGGGCGA CCTCGCGGCG CGGACCGGGA TCTCGCGGGC GGACGAGCTC
GGGGCCGTCG CGCGCGCGTT CGACGAGATG GCCGACCGCG TCGGCGCGCT GCTCCGCTCC
AGCACCGAGC TGATGGCCAA CGTGGCCCAC GAGCTGCGCA CCCCGCTCGC CCGCATCCGC
GTGGCGCTCG ACCTCGCCGC CGAAGGCGAC GCCGACGTCG CGCGCGCGTC GCTCGCGGAC
ATCGCGGAGG ACCTGTCCGA GCTGGAGCGC CTGGTGGACG ACGTGCTCGC CTCGGCGCGG
CTCGACCTGG CGGGGAACGG CGCCTCCTCC GCGGGCGGGG CGCCACCGCT CCGCCGGGCG
CGGCTGGACC CCGCGGGCGT GGTGCGGCAG GCGGTGGAGC GCCTCGGGCA CCGCCACCCG
GATCGCGCCG TCCGGCTCGA GCTCGGGCCC GACCTGCCCG AAGTCGAGGC GGACGCGGTG
CTGCTGCGCC GCGCGCTGGA CAACCTGCTC GACAACGCGC GCAAGTACTC GGCGCCGGCC
TCGCCGATCC GCGTGGAGGC GGCGCGCCGC GGCGCGGACC TGGTGGTCGA GGTGAGCGAT
CGCGGTGAGG GGATCGCCGC CGAGGAGCTG GAGCGCGTGT TCTCGCCGTT CTACCGGGTG
GACCGCAGCC GCGCGCGCGC CACCGGCGGC GTCGGCCTCG GGCTCCCGCT CGCGCGCCGC
ATCGCCGAGG CGCACGGCGG CACGCTCACG GCGCGCAGCA CGCCGGGGGA GGGCACCACC
CTCACGCTGA CCATCCCGGG CGTTCGCTGA
|
|---|
| Protein sequence | MSGGAGGGGP SRLGLRIYLV TVVAVLATGV AVLLALALAR DRREPVRRDV MHAVARDAAA
RVATQWGSAG AIQEVIGPLA SALRVSVAVY GAGGEPVASA GEAMRPPLPP PPERERFTDR
LGPGPPGAGG RERHVVSAVA PVVVAGAPVG FLVVAQQVPG GRPPPVLLVL VALALVGAGV
AAVVLGGSLA RPLDRLARTA RALGAGDLAA RTGISRADEL GAVARAFDEM ADRVGALLRS
STELMANVAH ELRTPLARIR VALDLAAEGD ADVARASLAD IAEDLSELER LVDDVLASAR
LDLAGNGASS AGGAPPLRRA RLDPAGVVRQ AVERLGHRHP DRAVRLELGP DLPEVEADAV
LLRRALDNLL DNARKYSAPA SPIRVEAARR GADLVVEVSD RGEGIAAEEL ERVFSPFYRV
DRSRARATGG VGLGLPLARR IAEAHGGTLT ARSTPGEGTT LTLTIPGVR
|
|---|
| |