| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | A2cp1_2818 |
|---|
| Symbol | sdhA |
|---|
| ID | 7298891 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaeromyxobacter dehalogenans 2CP-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011891 |
|---|
| Strand | + |
|---|
| Start bp | 3115203 |
|---|
| End bp | 3117113 |
|---|
| Gene Length | 1911 bp |
|---|
| Protein Length | 636 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 643595627 |
|---|
| Product | succinate dehydrogenase flavoprotein subunit |
|---|
| Protein accession | YP_002493221 |
|---|
| Protein GI | 220917917 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit |
|---|
| TIGRFAM ID | [TIGR01811] succinate dehydrogenase or fumarate reductase, flavoprotein subunit, Bacillus subtilis subgroup |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCGCTCG ACGCGAAGAT CCCGGCGGGG CCGATCGAGC AGAAGTGGGC GCAGCGCAAG
TACGAGCTGA AGCTGGTGAA CCCCGCCAAC AAGCGCCGGC ACCGGATCCT GGTGGTGGGC
ACCGGCCTGG CCGGCGCGTC CGCGGCGGCC TCGCTGGCCG AGCTGGGCTA CGAGGTCGAG
ACGTTCTGCT ACCAGGACAG CCCGCGGCGC GCGCACTCGA TCGCCGCGCA GGGCGGCATC
AACGCGGCGA AGAACTACCA GAACGACGGC GACTCGGTGG CGCGGCTCTT CTACGACACC
GTGAAGGGCG GCGACTTCCG CTCGCGCGAG GCCAACGTCC ACCGGCTCGC CGAGCTGTCG
GTGAACATCA TCGACCAGTG CGCGGCGCAG GGCGTGCCGT TCGCGCGCGA GTACGGCGGC
CTGCTCGCGA ACCGCTCCTT CGGCGGCGCG CTCGTCTCCC GGACGTTCTA CGCCCGCGGC
CAGACCGGCC AGCAGCTCCT GCTCGGCGCC TACCAGGCGC TGCAACGCCA GGTGGCGGCG
GGCAAGGTGG TGAGCCACCC GCGCTGCGAG ATGCTCGAGC TGGTGCTGGT GGACGGGCGG
GCGCGCGGCG TGGTCACCCG CGACCTCGTC ACCGGCGAGG TGCGCTCGCA TGCCGGCGAC
GCGGTGGTGC TCGCGACCGG CGGCTACGGC AACGTGTTCT ACCTCTCCAC GAACGCGCGC
GGCTGCAACG CCACCGCGGT CTGGCGCGCG CACCGCAAGG GCGCGCTGTT CGCGAACCCC
TGCTACACGC AGATCCACCC GACCTGCATC CCGCGCTCCG GCGAGTACCA GTCGAAGCTC
ACGCTCATGA GCGAGTCGCT CCGCAACGAC GGGCGGGTCT GGGTGCCCGC CCGCCGCGGC
GACGGGCGCC CGCCCGCCGA GATCCCCGAC CCGGAGCGCG ACTACTACCT GGAGCGGATG
TACCCGACCT ACGGCAACCT CGCGCCGCGC GACATCGCCT CGCGGGCGGC CAAGACCGTC
TGCGACGAGG GGCGCGGCGT CGGGCCCGGC GGGCTGGGCG TCTACCTCGA CTTCCGCGAC
GCGTTCGCGC GGCTGGGCCG GCGCGTGCTC GACGAGCGGT ACGGCAACCT GTTCGAGATG
TACGAGCGCA TCACCGGCGA CGATCCGCAC GACGTGCCGA TGCGGATCTA CCCCGCGGTG
CACTACACGA TGGGCGGGCT GTGGGTGGAC TACGACCTGC AGAGCACCCT CCCCGGCCTG
TTCGTGCTCG GCGAGGCGAA CTTCTCCGAC CACGGGGCGA ACCGGCTCGG CGCGAGCGCG
CTCATGCAGG GGCTCGCCGA CGGCTACTTC GTCGTCCCCT ACACGGTGGG CGACCACGTG
GCCCGCGCGC AGGCGAAGGT GGACACCTCG CACGCCGCCT TCCGGGACGC GGAGCGCGAG
GTGGCGTCGC GCACCGCGCG GCTGCTGTCC ATCGGCGGCC GGCGCACCGC CGACGACCTG
CACCGCGAGC TGGGCACGCT CCTCTGGACC GACGCGGGGA TGGCGCGCTC GCGGGCGTCG
CTGGAGCACG CGCTCGCCGA GATCCCGCGC ATCCGGGAGG CGTTCTGGAG CGACCTGCGG
GTACCGGGCA CCGGCGAGGA GCTGAACCAG GAGCTGGAGC GCGCCGGCCG CGTGGCCGAC
TTCCTGGAGC TGGCGGAGCT CCTGTGCCGC GACGCGCTGC ACCGCGAGGA GTCCTGCGGC
GGGCACTTCC GGGTCGAGCA CCAGACGCCC GACGGCGAGG CGCTTCGCGA CGACGAGCGG
TTCGCCTACG TGGCGGCGTG GGAGTGGACG GGGCCGGGCG AGGCCCCGGC GCTGCACCGG
GAGCCGCTCG CGTTCGAGTA CGTCCCGCTC CAGCAGCGCA GCTACAAGTG A
|
|---|
| Protein sequence | MPLDAKIPAG PIEQKWAQRK YELKLVNPAN KRRHRILVVG TGLAGASAAA SLAELGYEVE
TFCYQDSPRR AHSIAAQGGI NAAKNYQNDG DSVARLFYDT VKGGDFRSRE ANVHRLAELS
VNIIDQCAAQ GVPFAREYGG LLANRSFGGA LVSRTFYARG QTGQQLLLGA YQALQRQVAA
GKVVSHPRCE MLELVLVDGR ARGVVTRDLV TGEVRSHAGD AVVLATGGYG NVFYLSTNAR
GCNATAVWRA HRKGALFANP CYTQIHPTCI PRSGEYQSKL TLMSESLRND GRVWVPARRG
DGRPPAEIPD PERDYYLERM YPTYGNLAPR DIASRAAKTV CDEGRGVGPG GLGVYLDFRD
AFARLGRRVL DERYGNLFEM YERITGDDPH DVPMRIYPAV HYTMGGLWVD YDLQSTLPGL
FVLGEANFSD HGANRLGASA LMQGLADGYF VVPYTVGDHV ARAQAKVDTS HAAFRDAERE
VASRTARLLS IGGRRTADDL HRELGTLLWT DAGMARSRAS LEHALAEIPR IREAFWSDLR
VPGTGEELNQ ELERAGRVAD FLELAELLCR DALHREESCG GHFRVEHQTP DGEALRDDER
FAYVAAWEWT GPGEAPALHR EPLAFEYVPL QQRSYK
|
|---|
| |