Gene A2cp1_2227 details

Gene Information

• Locus tag: A2cp1_2227
• ID: 7297237
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Anaeromyxobacter dehalogenans 2CP-1
• Kingdom: Bacteria
• Replicon accession: NC_011891
• Strand: -
• Start bp: 2468340
• End bp: 2470166
• Gene Length: 1827 bp
• Protein Length: 608 aa
• Translation table: 11
• GC content: 71%
• IMG OID: 643595023
• Product: transcriptional regulator, NifA subfamily, Fis Family
• Protein accession: YP_002492631
• Protein GI: 220917327
• COG category: [K] Transcription; [T] Signal transduction mechanisms
• COG ID: [COG3604] Transcriptional regulator containing GAF, AAA-type ATPase, and DNA binding domains

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.025766
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGGCCACGC TCATCGTGAG AGGACCGGAC GGCTCCGAGC GCGAGGTCGC GCTGGTGAAG 
CGCATCACCA GCGTGGGCCG TGATCCGGAG AACGACGTGC CGGTGGAGGA CCCGGCGCTG 
CCCGCCACCG CGCTGCACAT CCACTTCGAC GGGAAGGACT ACAACGCCGC CGCCCACGAC 
CGCTCCGACA TGACGGTGAA CGGGAAGCGG CGGGGCGCCT GGCGCCTGGG GCCGGGCGAC 
CGGATCCGGG TGGCGGGCAC CGAGCTCACC TTCGAGGCCG TGGCGCGCAC GCCGCTGCCG 
TCGGCCCGGC CCATCGCCGG CCAGCGGCTG CAGGCGCTCG AGACGCTGGT GCGCTTCTCC 
GAGCGGCTCC TCGGGGCGAC CGACCTGAAC CGGCTGCTCG ACGAACTGAT GGACGCGCTG 
CTCGAGGTCA CCCACGCCGA CAAGGGGTTC CTGATCCTGC TCGAGGACGG GGAGATGAGC 
GTCCGCGCCG CGCGCAACGT GGCCCGCGAG ACCATCGAGG GCGCGGTCGA GCGGGTCTCC 
GACTCGATCA TCCGGCGCGT GGTGGAGACC CGCCGCGCGC TGGTGGTGGC CGACGCGCTG 
CACGACTCGG AGTGGTCGGG CTCGACGTCG GTGGTGAACC TGAAGCTCTG CTCGGTGATG 
TGCGCCCCGC TCATGCAGAA GGGCGAGGTC TTCGGCGTCA TCTACCTCGG CAACGACAAC 
GTGGTCTCGC TGTTCGACGA GCGCGCCCTC GAGCTGCTCG CGCCGTTCGC CGCGCAGGCG 
TCGCTGCTGG TGCAGAACGC CATGCTGCTC GACTCGCTGC GCCGCGAGAA CCTCTCCCTC 
AAGGAGGCGG TGGCGTCGCG GCAGTACGGC GACCTCATCG GCGCCGGCGC CTCGATGCGC 
GAGGTCTACC GGCGCATCGA CAAGGTGGCC GGGACCGACA TCTCGGTGCT GGTGTCCGGC 
GAGACCGGCA CCGGCAAGGA GGTGGTGGCC CGCGAGATCC ACCGGCGCTC CACGCGCGCC 
ACCGGGCCGT TCGTGGCGGT GAACTGCGGC GCCATCCCGG AGGCGCTGCT CGAGTCCGAG 
CTGTTCGGCC ACGTGAAGGG CGCGTTCACC GGGGCGGTGG CCACCCGCAT CGGCAAGTTC 
CAGGCGGCCC ACGGCGGCAC GCTGTTCCTC GACGAGATCG GCGACATGCC GCTCGCGCTG 
CAGGTGAAGA TCCTGCGGGC GCTGCAGGAT CGCGCCGTCA CCAAGGTGGG CGACAACCGC 
CCGGAGGCGG TGGACCTGCG GGTGGTGGCC GCCACGAACC GCGTGCTCGA GGACGAGATC 
CGCAAGGGCA CGTTCCGCGA GGACCTGTAC TACCGGCTGA ACGTGGTCGC CATCCACCTG 
CCCCCGCTCC GCGATCGCGG CGAGGACGTG GTGGTCATCG GCAAGTACTT CCTGCAGAAG 
TACGCGAAGG AGTTCGGCGC GCGCGTGCGC GGGTTCACCC CCGGCGCGCT CGTGGCCATG 
CGCAAGTACG CGTGGCCGGG CAACATCCGC GAGCTCGAGA ACCGGGTGAA GAAGGCGGTG 
GTGCTGGCCG ACCGCGCGCT GGTCTCGGCG GAGGACCTCG ATCTCCGCCC GGAGATCCTC 
GAGCCCATCC TCCCGCTCGC CCAGGCGAAG GAGGAGTTCC AGAAGCGGTA CATCAACGAG 
GTGCTGGAGC GGAACGCCGG GAACCGCACC AAGACCGCGA AGGACCTGGG CGTGGACCCG 
CGCACCGTGT TCCGCCACCT CGAGAAGCTC GAGGCCGAGC GGCGCGGCCA GGTCCTGCCG 
CCCGACGACG AGGAGACCGA GGCGTGA 

 

Protein sequence

MATLIVRGPD GSEREVALVK RITSVGRDPE NDVPVEDPAL PATALHIHFD GKDYNAAAHD 
RSDMTVNGKR RGAWRLGPGD RIRVAGTELT FEAVARTPLP SARPIAGQRL QALETLVRFS 
ERLLGATDLN RLLDELMDAL LEVTHADKGF LILLEDGEMS VRAARNVARE TIEGAVERVS 
DSIIRRVVET RRALVVADAL HDSEWSGSTS VVNLKLCSVM CAPLMQKGEV FGVIYLGNDN 
VVSLFDERAL ELLAPFAAQA SLLVQNAMLL DSLRRENLSL KEAVASRQYG DLIGAGASMR 
EVYRRIDKVA GTDISVLVSG ETGTGKEVVA REIHRRSTRA TGPFVAVNCG AIPEALLESE 
LFGHVKGAFT GAVATRIGKF QAAHGGTLFL DEIGDMPLAL QVKILRALQD RAVTKVGDNR 
PEAVDLRVVA ATNRVLEDEI RKGTFREDLY YRLNVVAIHL PPLRDRGEDV VVIGKYFLQK 
YAKEFGARVR GFTPGALVAM RKYAWPGNIR ELENRVKKAV VLADRALVSA EDLDLRPEIL 
EPILPLAQAK EEFQKRYINE VLERNAGNRT KTAKDLGVDP RTVFRHLEKL EAERRGQVLP 
PDDEETEA