| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | A2cp1_2058 |
|---|
| Symbol | |
|---|
| ID | 7300185 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaeromyxobacter dehalogenans 2CP-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011891 |
|---|
| Strand | + |
|---|
| Start bp | 2298161 |
|---|
| End bp | 2300413 |
|---|
| Gene Length | 2253 bp |
|---|
| Protein Length | 750 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 80% |
|---|
| IMG OID | 643594853 |
|---|
| Product | Lytic transglycosylase catalytic |
|---|
| Protein accession | YP_002492465 |
|---|
| Protein GI | 220917161 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.623161 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTCACCG CCGCGCTCAC CGCCTGCCTC CTCGCCGCCG CCCCGACCCC CACGCCCCCG
CCGCTCCGCG AGGCCGACCT CGCGCCGCTG TTCCGCAAGG GCCCCGCCGC GGAGGGAAAG
GCCGCCTACG ACGCCGGGCG CCACGCCGAC GCCGCCGCGC GGCTCGCGAG GGCGCCCGAG
CCGGAGGCGG CCTACATCCG CGCGCTGGCG CTCCTGGAGG TCCCGCGGCC CGAGGAGGCG
CTGAAGGTCC TCGCCGGCCT CGAGGAGAAG GTGCCCGACC TCGCCGACCG CGTGGCGTTC
CTGCGCGGCG CGGCGCTGTC CGCGGCGGGA CGCCCGCGCG AGGCGATGGC GGCGTGGGCG
CAGGTGCCGG ACCGGTCGCT GCTCGCCGCC GAGGCGCGGC TCTCGCGGGC GCGCGCCGCG
TCGGCGCTCG GCGAGGGCGC GGCCGCGCTC GAGGCGCTCG CGCCGCTGCT GCGCGACGGC
GCGCCGGACG ATCTCTCCCG GCCCGACCTC GCCGCCTCCG CGCTGCTCCT CGCCGGCCGG
ATCCGCGGCG CAGCGCGGCC CCCCGATCCC GCCGGCGCGC GGCGCGACCT GATGGCGTGC
TGGACGGCGC ACCCGCTCGC GCCGGAGTCC TCGGAGTGCC TCTCCGCGGC GGCCGCGCTG
CCGGCGCCGC ACGGCGGCCC GCCCTCGGCC GAGGAGACGC TGCGGCGCGC GGAGGGGCTG
CTCGACGCGA ACCGCAACGG GCAGGCGCTG GCGCTGCTCG AGCCCGCGGT GGCCGCGCTC
CGCCCCGACG ACCTCGGCGC CGCCGCGTGC CGCGCCCGGG CGGCGCTGGG CCGCGGCTAC
CGCAAGGAGC GCAGCTACCG GCAGGCGATC GACACGCTGC GGCCGGTGGT GGCGGGCTGC
GAGGACGAGG GGCTGCGGGT CCGCTCGCTG TACCTGCTCG CCGGCGCGTC GTCCATCTCC
GGGGATCGCG ACGAGGCGGT GGCGCTGTAC CGCCAGCTGG CGCGCGACTT CGCCGGCCAC
GCGTTCGCCG ACGACGCGCT GTTCTTCGCC GCAGACCTCC TGGCGCGCGC CGGCAAGTCG
CAGGAGGCCC GCGAGGCGCT CGCGGCGCTG GTGCGGGATC ACCCGGGCGG CGACTACCGC
GAGGAGGCGC GCTTCCGGCT CGCGTGGCTG CTGAAGCAGG CGGGCGACCT GGATGGCGCG
GTCGCGCAGC TCCTCGCGGT CGAGGAGGAG CAGGCGGGCC GCGACGGCTA CGAGCACGCC
CGGGCGGCCT ACTGGCGCGC GCGGCTGCTG GCCGGGCGCG GCGAGGACGG GCGCCGGGCC
GCCGAGGCGG TGTTCACCGA GCTCGCCACG CGCTACCCCA CCGACTACTA CGGCCTGCTC
GCCCGGGCCC GGCTCGACGG CCACGGCGGC CAGAGCCTCC CCGCGCGGCG GGCCGCGCCG
GCCGGCGGCA CCCCCGAGGC CGCCTACGAC CCCGGCCCGC TGCGCGAGGA GCCGCACTTC
CGCGCCGGCC TGCTGCTCCT GCGCATGGGC CTGCCGCGCG CCGCGTCGGA GGAGCTGTCG
GCGATCCCGG CCGCGCGGCT GCGCGCGGCC GGCGACGCGC CCGAGCCGGT GCTGCTGGTG
GCCGACCTGC TCGACCGCGC CGGCGACCAC CGCGCCGCGC ACAACCTGCT GCGCACCCGC
GCCCGCGGCG CGCTCCGCAA GCCGCCCGAG GGCGAGAACC TGCGCGCCTG GCGCATCGCG
TACCCGCCGG CCTACCGCGA CGACGTGCGC CGCTGGGCGC CGCCCGCGGG CGTGCCGGTG
GAGCTGGTGC AGGCGCTCAT GCGCGAGGAG AGCGCGCTCG ACCCGCGCGC CATGTCCGGC
GCCGGCGCGG TCGGCCTCAC CCAGCTCATG CTGCCCACCG CGCAGTCGGT GGCGAAGAGC
CTGAAGCTCT CCCGCCCGAC GCGCACCGAC CTCATGCGCG CGTCGCTCAA CATCCGACTC
GGCTCGCACT ACCTGGGCGA GCTGGTGCGC CGGTTCGACG GCTCGCTCCC GCTCGCGCTC
GCAGCGTACA ACGCCGGCGG CGGGGCGGTC CGGCGCTGGC TGGGCGGGCG CGACGCGCTC
GACGTGGACG AGTTCGTGGA GGAGATCCCG GTGGAGGAGA CGCGCGGCTA CGTGAAGCGC
GTGCTCCGGT CCTACGCCGC GTACCGGCTG CTCTACGGCG CGCCCGAGGA GGCGTCCCTC
GGGCTGCTCC GCCGCGCCGG GGGCAAGGGC TGA
|
|---|
| Protein sequence | MLTAALTACL LAAAPTPTPP PLREADLAPL FRKGPAAEGK AAYDAGRHAD AAARLARAPE
PEAAYIRALA LLEVPRPEEA LKVLAGLEEK VPDLADRVAF LRGAALSAAG RPREAMAAWA
QVPDRSLLAA EARLSRARAA SALGEGAAAL EALAPLLRDG APDDLSRPDL AASALLLAGR
IRGAARPPDP AGARRDLMAC WTAHPLAPES SECLSAAAAL PAPHGGPPSA EETLRRAEGL
LDANRNGQAL ALLEPAVAAL RPDDLGAAAC RARAALGRGY RKERSYRQAI DTLRPVVAGC
EDEGLRVRSL YLLAGASSIS GDRDEAVALY RQLARDFAGH AFADDALFFA ADLLARAGKS
QEAREALAAL VRDHPGGDYR EEARFRLAWL LKQAGDLDGA VAQLLAVEEE QAGRDGYEHA
RAAYWRARLL AGRGEDGRRA AEAVFTELAT RYPTDYYGLL ARARLDGHGG QSLPARRAAP
AGGTPEAAYD PGPLREEPHF RAGLLLLRMG LPRAASEELS AIPAARLRAA GDAPEPVLLV
ADLLDRAGDH RAAHNLLRTR ARGALRKPPE GENLRAWRIA YPPAYRDDVR RWAPPAGVPV
ELVQALMREE SALDPRAMSG AGAVGLTQLM LPTAQSVAKS LKLSRPTRTD LMRASLNIRL
GSHYLGELVR RFDGSLPLAL AAYNAGGGAV RRWLGGRDAL DVDEFVEEIP VEETRGYVKR
VLRSYAAYRL LYGAPEEASL GLLRRAGGKG
|
|---|
| |