Gene A2cp1_2019 details

Gene Information

• Locus tag: A2cp1_2019
• Symbol: rplD
• ID: 7300146
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Anaeromyxobacter dehalogenans 2CP-1
• Kingdom: Bacteria
• Replicon accession: NC_011891
• Strand: +
• Start bp: 2272920
• End bp: 2273540
• Gene Length: 621 bp
• Protein Length: 206 aa
• Translation table: 11
• GC content: 69%
• IMG OID: 643594814
• Product: 50S ribosomal protein L4
• Protein accession: YP_002492426
• Protein GI: 220917122
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0088] Ribosomal protein L4

Plasmid Coverage information

• Num covering plasmid clones: 24
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCCAAGT TCGACGTCTA CGACCTGTCG AAGAAGAAGG TGGGCGAGCT CGACCTCGCC 
GACGCCGTCT TCGCCGGCGA GGTGAACGAG CACCTCTTCT ACGAGGTGGT GAAGGCGAAG 
CTCGCCTCCG ATCGCTCGGG CACCCACGCG GTGAAGAACC GGTCCCTCGT CTCCGGCGGC 
GGCAAGAAGC CCTGGAAGCA GAAGCACACC GGTCGCGCCC GCCAGGGCTC GACGCGCGCG 
TCCCAGTGGG TGGGCGGCGG CAAGGCCATG GGGCCGAAGC CGCGCGACTA CTCCTACGAC 
GTGCCGAAGA AGGTGCGGAA GGCCGCGCTG CGTTCGGCCC TCGCGCTCCG CTCCAAGGAC 
CAGAAGCTGG TCATCGTGCA GGAGTGGAAG CCCGGGGCGC CGAAGACCGC CGCCGCCGCC 
AAGGTCCTCT CCGCGCTCGG CGCGAAGAAG GCCCTGGTGG TGGACGACGC CGCGAACCTC 
GCCCTCGCGA AGAGCGTCCG GAACCTGCAC GGCTCCGACT TCCTCGCGGT GGAGGGGCTC 
AACGTGTACG ACATCCTGCG GCACGACGCC CTGGTGCTGA CCGCGGACAC CGCCAAGAAG 
CTGGAGGCCA GCCTGTCATG A 

 

Protein sequence

MAKFDVYDLS KKKVGELDLA DAVFAGEVNE HLFYEVVKAK LASDRSGTHA VKNRSLVSGG 
GKKPWKQKHT GRARQGSTRA SQWVGGGKAM GPKPRDYSYD VPKKVRKAAL RSALALRSKD 
QKLVIVQEWK PGAPKTAAAA KVLSALGAKK ALVVDDAANL ALAKSVRNLH GSDFLAVEGL 
NVYDILRHDA LVLTADTAKK LEASLS