Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | A2cp1_1972 |
Symbol | |
ID | 7296627 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anaeromyxobacter dehalogenans 2CP-1 |
Kingdom | Bacteria |
Replicon accession | NC_011891 |
Strand | - |
Start bp | 2227079 |
End bp | 2228002 |
Gene Length | 924 bp |
Protein Length | 307 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 643594766 |
Product | RNA polymerase, sigma 32 subunit, RpoH |
Protein accession | YP_002492379 |
Protein GI | 220917075 |
COG category | [K] Transcription |
COG ID | [COG0568] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) |
TIGRFAM ID | [TIGR02392] alternative sigma factor RpoH [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGCGCC AGAGCGTCCC CGGTACCGCG AGCTCCCTCG AGGTCTACCT CTCGGAGATC AATCGGTTTC CGCTGCTGAC GGTCGAGGAC GAGCAGCGGC TGGCCCGGCA GTACTGCGCA GATCGCGACA CCCGCGCCGC CCACCGGCTG GTCACCGCGA ACCTCCGCTT CGTGGTCAAG GTCGCCTACG AATACCGCTC CTACGGGTTC CGCATGGCCG ACCTCATCCA GGAGGGCAAC ATCGGCCTGA TGAAGGCGGT CCAGAAGTTC GATCCGGACA AGGGCATCCG CCTCATCTCG TACGCGGTCT GGTGGATCCG CGCGTACATC CAGAACTACA TCCTCAAGTC CTGGTCGCTG GTGAAGCTCG GGACGACGCA GGCGCAGCGC AAGCTGTTCT TCTCGCTGGC CCGGACGAAG CGCGAGCTCG ACAAGCGCTC CCAGGAGCAC GGCGCCGACT CCGACGGGCA CGACGCGAAC AAGGTGGCGA AGAAGCTCCG CGTGAAGCCC GGCGAGGTCC GCGAGATGGA GCAGCGGATG GAGGGGCGCG ACCTGTCGCT CGACGCGCCC ATGGGCGACG ACGGTGGCTA CTCCCACGTG GACTTCCTCC CCTCCGGCAC CGCCTCGCAG GACGACGAGC TGTCCGGCGT GCAGGAGCAG AAGGTCGTCT CCGGCCGGGT CGTCGAGGCG CTGGGCCGCC TCGACCAGCG CGAGCGCTAC ATCATCGAGA TGCGCGTGAT GAGCGACCGC CCGCTCACGC TCAAGGAGCT GGGCGAGCAC TTCGGCTTCT CGCGCGAGCG CGCCCGGCAG CTCGAGATCC GCGCCAAGGA GAAGCTGAAG GAGGAGCTGC GCGCGCTCGC GACCGAGATC GACTGGCCCA CCGACGGCGC GCCGGTGGAC ATCGACGACC GCGCGCTGGC CTGA
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Protein sequence | MKRQSVPGTA SSLEVYLSEI NRFPLLTVED EQRLARQYCA DRDTRAAHRL VTANLRFVVK VAYEYRSYGF RMADLIQEGN IGLMKAVQKF DPDKGIRLIS YAVWWIRAYI QNYILKSWSL VKLGTTQAQR KLFFSLARTK RELDKRSQEH GADSDGHDAN KVAKKLRVKP GEVREMEQRM EGRDLSLDAP MGDDGGYSHV DFLPSGTASQ DDELSGVQEQ KVVSGRVVEA LGRLDQRERY IIEMRVMSDR PLTLKELGEH FGFSRERARQ LEIRAKEKLK EELRALATEI DWPTDGAPVD IDDRALA
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