Gene A2cp1_1920 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagA2cp1_1920 
Symbol 
ID7296575 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaeromyxobacter dehalogenans 2CP-1 
KingdomBacteria 
Replicon accessionNC_011891 
Strand+ 
Start bp2160177 
End bp2160860 
Gene Length684 bp 
Protein Length227 aa 
Translation table11 
GC content77% 
IMG OID643594715 
ProductABC transporter related 
Protein accessionYP_002492328 
Protein GI220917024 
COG category[V] Defense mechanisms 
COG ID[COG1136] ABC-type antimicrobial peptide transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0842487 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGCCCG TGCTCACGTT CCGTGAAGTG ACGCGCACCT TCGCGGGGGC CGGGGGCGTC 
CCGCTGCCGG TGCTGCGCGG CGTCTCGGCC GAGCTGCCCG CCGGCCGCGC GGTGGCGATC 
ACCGGGCGGA GCGGGTCGGG GAAGTCCACG CTGCTCCACC TCGCCGCCGG CATCGACGCG 
CCCACCTCCG GCGAGGTGCT GCTGCTCGGA CGCTCGCTGG GCGCGCTCCC CGACGCGGAG 
CGCACCCGGG CCCGGCGCGA CCACGTCGGC CTCGTCTTCC AGTTCTTCCA CCTGCTGCCG 
CACCTCTCGG TGGAGGACAA CGTGCTCGTG CCGGCGCTGG TGGCCGGCGA CCCGCCCGGC 
GGGGCCGCGG CGCGCGCCCG GGAGCTGCTC GAGCGGGTGG GGCTGGAGGG GCGCGCGCGC 
GAGGCGGTGC AGAAGCTCTC GGGCGGCGAG ATGCAGCGCG TGGCGCTCTG CCGGGCGCTG 
CTGCGCCGCC CGAAGCTGCT CCTCGCCGAC GAGCCGACCG GGAACCTGGA CGAGGCCAAC 
GGGCAGACGG TCATGGACCT GCTGCTCGGG CTCGCGCGCG AGGAGGGGAG CGCGGTGCTG 
TACGTGACGC ACAGCCGGGA GCTGGCGGCG CTCGCCGACG CCACCTGGAC GCTGCACGCC 
GGCCGCCTGG AGCAGGGCGG GTGA
 
Protein sequence
MAPVLTFREV TRTFAGAGGV PLPVLRGVSA ELPAGRAVAI TGRSGSGKST LLHLAAGIDA 
PTSGEVLLLG RSLGALPDAE RTRARRDHVG LVFQFFHLLP HLSVEDNVLV PALVAGDPPG 
GAAARARELL ERVGLEGRAR EAVQKLSGGE MQRVALCRAL LRRPKLLLAD EPTGNLDEAN 
GQTVMDLLLG LAREEGSAVL YVTHSRELAA LADATWTLHA GRLEQGG