Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | A2cp1_1888 |
Symbol | |
ID | 7296414 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anaeromyxobacter dehalogenans 2CP-1 |
Kingdom | Bacteria |
Replicon accession | NC_011891 |
Strand | + |
Start bp | 2118906 |
End bp | 2120528 |
Gene Length | 1623 bp |
Protein Length | 540 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 643594683 |
Product | hydro-lyase, Fe-S type, tartrate/fumarate subfamily, beta subunit |
Protein accession | YP_002492296 |
Protein GI | 220916992 |
COG category | [C] Energy production and conversion |
COG ID | [COG1838] Tartrate dehydratase beta subunit/Fumarate hydratase class I, C-terminal domain [COG1951] Tartrate dehydratase alpha subunit/Fumarate hydratase class I, N-terminal domain |
TIGRFAM ID | [TIGR00722] hydro-lyases, Fe-S type, tartrate/fumarate subfamily, alpha region [TIGR00723] hydro-lyases, Fe-S type, tartrate/fumarate subfamily, beta region |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCGACTC CCGCGTTCCA CTACCAGGAC CCGTTCCCCG TCTCGAAGGA CGCGACCAAG TACCGGCTCC TCACCAGCGA GGGCGTGTCG GTCGGGACGT TCGAGGGCAA GGAGATCCTG AAGGTCGAGC CGGCGGCGCT CACCCGCCTC GCGCGCGAGG CGATGCGCGA GGTGTCGTTC TTCCTCCGCC CCGAGCACAA CGAGCAGGTC GCGAAGATCC TGGCAGACCC CGAGGCGTCG CAGAACGACA AGGGCGTCGC CATCGCGTTC CTCAAGAACG CCGAGATCGC GGCCCGCGGC GAGCTGCCCA TCTGCCAGGA CACCGGCACC GCCACCATCG TGGCGAAGAA GGGCCAGCAG GTCTGGACCG GCGTGAAGGA CGAGCAGTAC CTGTCGGAGG GCGTGTACCT CACCTACACC GGCGAGAACC TCCGCTACTC CCAGACCTCC GCGCTCGACA TGTACCGCGA GGTGAACACC GGCACGAACC TGCCGGCGCA GATCGACGTC CTCGCGACCG AGGGCGCCGA GTACAAGTTC CTGTTCGTGG CGAAGGGCGG CGGGTCGGCC AACAAGACCA TGCTGTTCCA GGAGACCAAG GCGCTCCTCA CGCCGGAGAA GCTCGAGAAG TTCCTGGTCG ACAAGATGAA GTACCTCGGC ACCGCCGCCT GCCCGCCGTA CCACATCGCG GTGGTGGTGG GCGGCACGAG CGCCGAGACC TGCCTGAAGA CGGTGAAGCT CGCCTCGACG AAGTACTACG ACGGCCTCCC CACCGAGGGG AACGAGCACG GCCAGGCGTT CCGCGACGTC GCGCTGGAGC AGCGGCTGCT CGAGGCGGCC AACAAGCTCG GCATCGGCGC GCAGTTCGGC GGCAAGTACT TCGCGCACGA CATCCGCGTG GTGCGGCTGC CGCGCCACGG CGCCTCCTGC CCGGTCGGCA TGGCGGTGTC CTGCTCGGCC GACCGCAACG TGAAGGCGAA GATCAACAGG GAAGGGCTCT GGATCGAGGA GCTCGACCAC GCGCCGGGCC GCCTCATCCC GCTCGAGCTG AAGAAGGGCA AGCACGAGCA CGGCGTGAAG GTGGACCTCA ACAAGCCCAT GAAGGAGATC CTGGCCGAGC TGACGAAGTA CCCGGTCTCG ACCCCGCTGC TCCTCACCGG CACGCTGGTG GTGGCCCGCG ACATCGCGCA CGCGAAGTTC AAGGAGCTGA TCGACCAGGG CAAGGGCGTG CCCGAGTACC TGAAGCACCA CCCGGTGTAC TACGCCGGCC CGGCCAAGAC GCCGAAGGGC AAGCCGTCCG GCTCGTTCGG CCCCACCACC GCCGGCCGCA TGGACTCGTA CGTGGACCTG CTGCAGTCGC ACGGCGCGTC GATGGTGATG ATCGCGAAGG GCAACCGCAG CCAGCAGGTG ACCGACGCGT GCAAGAAGCA CGGCGGCTTC TACCTGGGCT CGATCGGCGG CCCGGCCGCG GTGCTGGCCG AGGAGAACAT CAAGAAGGTG GAGTGCATCG ACTTCGCCGA GCTCGGCATG GAAGCCGTCT GGAAGATCGA GGTCGAGAAC TTCCCCGCGT TCATCCTGGT GGACGACAAG GGCAACGACT TCTTCAAGAA GCTGGGGATG TAG
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Protein sequence | MATPAFHYQD PFPVSKDATK YRLLTSEGVS VGTFEGKEIL KVEPAALTRL AREAMREVSF FLRPEHNEQV AKILADPEAS QNDKGVAIAF LKNAEIAARG ELPICQDTGT ATIVAKKGQQ VWTGVKDEQY LSEGVYLTYT GENLRYSQTS ALDMYREVNT GTNLPAQIDV LATEGAEYKF LFVAKGGGSA NKTMLFQETK ALLTPEKLEK FLVDKMKYLG TAACPPYHIA VVVGGTSAET CLKTVKLAST KYYDGLPTEG NEHGQAFRDV ALEQRLLEAA NKLGIGAQFG GKYFAHDIRV VRLPRHGASC PVGMAVSCSA DRNVKAKINR EGLWIEELDH APGRLIPLEL KKGKHEHGVK VDLNKPMKEI LAELTKYPVS TPLLLTGTLV VARDIAHAKF KELIDQGKGV PEYLKHHPVY YAGPAKTPKG KPSGSFGPTT AGRMDSYVDL LQSHGASMVM IAKGNRSQQV TDACKKHGGF YLGSIGGPAA VLAEENIKKV ECIDFAELGM EAVWKIEVEN FPAFILVDDK GNDFFKKLGM
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