Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | A2cp1_1868 |
Symbol | |
ID | 7296394 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anaeromyxobacter dehalogenans 2CP-1 |
Kingdom | Bacteria |
Replicon accession | NC_011891 |
Strand | + |
Start bp | 2096355 |
End bp | 2099417 |
Gene Length | 3063 bp |
Protein Length | 1020 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 643594663 |
Product | formate dehydrogenase, alpha subunit |
Protein accession | YP_002492276 |
Protein GI | 220916972 |
COG category | [C] Energy production and conversion |
COG ID | [COG0243] Anaerobic dehydrogenases, typically selenocysteine-containing |
TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type [TIGR01553] formate dehydrogenase, alpha subunit, proteobacterial-type |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCCTGA GCAGAAGAAA TTGGTTGAAG ATTGCAGCCG GGGGCACGGC CGGGCTGGCG CTCGCCGACC TGGGCTTCGG CCCGGGTGAG GCGCGGGCCG CCACCGGCGC CCTGAAGCTG AAGGGCACCA AGGAGTTCAC CACCGCCTGC AACTTCTGCT CGTGCGGCTG CGGCATGGTC GCCCACGTCA AGGACGGGCA GCTGGTCAAC CTCGAGGGCG ATCCGGACCA CGCCATCAAC TTCGGCGCGC TCTGCACCAA GGGCGCGGCC ATGAAGGCCA CGCACGACTC GCCGCAGCGG GTGAAGGTCC CGATGTACCG CGCGCCGGGC TCCGACCGCT GGGAGGAGCT CTCCTGGGAG CAGGCGTACG AGAAGCTCGC CCGGAAGCTC AAGGAGGTCC GCGACGCGAG CTGGACCGCC ACCGAGCAGG ACGGCGACAC CGAGTACCCG GTCAACCGGA CCGACGCGAT CGCGCTCATG GGCGGCGCCC AGAACACGAA CGAGGAGTGC TACCTCTTCA ACAAGATGGG CCGTCTCCTC GGGACGAGCT ACGTCGAGCA CCAGGCCAGG CTTTGACACA GCCCCACCGT CCCCAGTCTG GGGGCATCGT TCGGCCGTGG CGCGATGACG AATGGTTGGG CTGACCTGCA GAACGCCAAG GTCTTCCTGA TCGAGGGATC CAACGCCGCC GAGAACCACG TGATGGCGAT GAAGTGGATC CGCAAGGCGC AGGAGAAGGG CGCCAAGATC ATCCACGTCG ATCCGCGCTT CAACCGCACC TCCTCGGTCG CCGACGTGTT CGCGCGCATC CGTCCGGGCT CGGACATCGC GTTCCTGTCG GCCGTCATCA ACCACGTGCT GCAGAAGCGC CTCTACGACG AGGCGTACGT GAAGCTGCAC ACGAACGCGC TGCTCGTCTC GAAGGACGAG TTCGGCTTCG ACGAGGGCGT GTTCTCGGGC TACGACCACG AGAAGCACAA GTACGACAAC GCCTCGTGGG GCTACGAGCT CGACGCCGCG CGCAAGCCGG TCAAGGCGAA GGACCTCGAC GACCCGCGCT GCGTGTTCTC GAAGCTGAAG CGGCACTTCG CGCGCTACAC GCCGGAGGTG GCGGAGCAGA TCTCGGGCGT GCCGGCGAAG CAGGTGGTCG AGATCGCGGA GCTGTACGCG AACAACCGCC CCGGCACGAT CCTGTACGCG CTCGGGATGA CCCAGCACAC GGTGGGCATC CAGAACATCC GCTGCTACGG CATCCTGCAG ATGCTGCTCG GCAACATCGG CGTGGCGGGC GGCGGCGTGA ACGCGCTGCG CGGCGAGCCG AACGTGCAGG GCGCCTGCGA CATGTCCGTG CTGCACGGCT ACATGTTCGG CTACCTGAAC TACCCCGAGC ACGTCCACAG GACGTTCAAG GACTGGACGA AGGCCAACGG CAGCTTCCGC GCGAAGATGA CCGCGAACGG CCTGAAGGCG TGGTTCGGCG AGAACGCCAC CCCCGAGAAC GAGTTCGGCT GGGCCTGGCT GCCGAAGAAG AGCGCCAAGA AGGACTACTC GCTGTACGGC ATCCTCGACG CCGCCTACGC CGGGCAGGTG AAGGTGCTGT GGGCCCTCGG GCAGAACCCG ATGGTCACGA ACCCGAACCT CTCCTACGTG CACGACGCGC TGTCGAAGCT CGACATGCTG GTGGTGCAGG AGCTGTGGGA GACCGAGACC GCCGCGTTCT GGCAGCGCCC GGGCACCGAC CCGAAGGCGA TCCAGACCGA GGTGCTGCTG CTGCCGGCCG CGTACTTCAT GGAGAAGGAG GGCACCATCA CCGGCTCGGG CCGCATGGTG CAGTGGCGCC ACGAGGCGGT GAAGCCGCCC GGGCAGGCCA AGACCGACCT CGAGATCATC GACGCGGTCT ACCGCAAGGT CCGCGACCTG TACGCCGGGT CGGCGGATCC CAAGGACGCG CCGCTCGCCA AGGCGGCCTG GGACTACCGT GCCGAGAGCC GCGCCGAGGA CGTGCTGAAG GAGATCAACG GCCGCGTGCA CCGCGACGTG ACGCTCCCCG ACGGCAAGGT GCTGAAGGCG GGTGACTTCG TGGGCGGCAT CGGCCAGCTG CAGGCCGACG GCTCCACCTC GTCGGGCGTC TGGCTGTACG CGGGCGTCTT CGCCGGCGGG AAGAACCTGT CGAAGCGTCG CGACAGCTCG GACAAGTCCG GCATCGGCTT CTACAAGGAC TTCGCCTGGT CGTGGCCGGG CAACATGAAG ATCCTCTACA ACCGCGCCTC CTGCGACGCG AACGGCAAGC CCTGGCCCGG GACCATCCCG ATCATCGCCT GGGACGAGAC CGAGAAGAAG TGGAAGGGCA AGGACACGCC GGACGTGCCG GACGCCACCA AGGGCCCGGA CACGCCGGAG GGCCAGCGCG CGTTCCGCAT GAACGCCGAG GGCCTGGGGC GGCTCATGGC CGCGCCGTAC AAGTCCTTCA AGGAGGCGAA GGACGAGCTG CCGATCGACA GCTCCTACGT GCCGAAGGAC GGTCCTTTCC CCGAGCACTA CGAGCCGGTC GAGAGCCCGG TCGCGAACGT CATGCACCCG AAGGTGCAGA CGAACCCGTG CCTCAAGTAC CCGCGGGTCA AGGCCAAGCA GCCCATCGGC GCGTCGAAGG ACTTCCCGTA CGTGCTCATG ACCTCGTCCA TCGCGGAGCA CTGGTGCGCC GGGTCCACCA CGCGCAACGT GCCGTGGCTG AACGAGCTGT TCCCGGAGCC GGTGATCGAG CTGCCGGAGA AGCTGGCCGC GAAGCTCGCG ATCCGGTCGG GCGACAAGGT GAAGGTGACC TCGGCGCGCG GGAACGTGAC GGTGAAGGCC GTCGTCACCA AGCGCATGCA GGTCATGACG ATCGCCGGCC AGGAGGTGCC GGTGGTGTGG ATGCCCTACA ACTGGGGGTT CAAGGGCCTC AGCACCGGTC CGAGCACCAA CTACCTGACC ATCGACGCGG TGGACCCGGG AGCCGGCACC CAGGAGACGA AGGCGTGCCT CGTCGACGTC GCTCGCGTGG AGGAGGCCGT CGCCTCGCGG TAG
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Protein sequence | MTLSRRNWLK IAAGGTAGLA LADLGFGPGE ARAATGALKL KGTKEFTTAC NFCSCGCGMV AHVKDGQLVN LEGDPDHAIN FGALCTKGAA MKATHDSPQR VKVPMYRAPG SDRWEELSWE QAYEKLARKL KEVRDASWTA TEQDGDTEYP VNRTDAIALM GGAQNTNEEC YLFNKMGRLL GTSYVEHQAR LUHSPTVPSL GASFGRGAMT NGWADLQNAK VFLIEGSNAA ENHVMAMKWI RKAQEKGAKI IHVDPRFNRT SSVADVFARI RPGSDIAFLS AVINHVLQKR LYDEAYVKLH TNALLVSKDE FGFDEGVFSG YDHEKHKYDN ASWGYELDAA RKPVKAKDLD DPRCVFSKLK RHFARYTPEV AEQISGVPAK QVVEIAELYA NNRPGTILYA LGMTQHTVGI QNIRCYGILQ MLLGNIGVAG GGVNALRGEP NVQGACDMSV LHGYMFGYLN YPEHVHRTFK DWTKANGSFR AKMTANGLKA WFGENATPEN EFGWAWLPKK SAKKDYSLYG ILDAAYAGQV KVLWALGQNP MVTNPNLSYV HDALSKLDML VVQELWETET AAFWQRPGTD PKAIQTEVLL LPAAYFMEKE GTITGSGRMV QWRHEAVKPP GQAKTDLEII DAVYRKVRDL YAGSADPKDA PLAKAAWDYR AESRAEDVLK EINGRVHRDV TLPDGKVLKA GDFVGGIGQL QADGSTSSGV WLYAGVFAGG KNLSKRRDSS DKSGIGFYKD FAWSWPGNMK ILYNRASCDA NGKPWPGTIP IIAWDETEKK WKGKDTPDVP DATKGPDTPE GQRAFRMNAE GLGRLMAAPY KSFKEAKDEL PIDSSYVPKD GPFPEHYEPV ESPVANVMHP KVQTNPCLKY PRVKAKQPIG ASKDFPYVLM TSSIAEHWCA GSTTRNVPWL NELFPEPVIE LPEKLAAKLA IRSGDKVKVT SARGNVTVKA VVTKRMQVMT IAGQEVPVVW MPYNWGFKGL STGPSTNYLT IDAVDPGAGT QETKACLVDV ARVEEAVASR
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