| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | A2cp1_1586 |
|---|
| Symbol | |
|---|
| ID | 7296344 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaeromyxobacter dehalogenans 2CP-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011891 |
|---|
| Strand | - |
|---|
| Start bp | 1773331 |
|---|
| End bp | 1774410 |
|---|
| Gene Length | 1080 bp |
|---|
| Protein Length | 359 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 80% |
|---|
| IMG OID | 643594382 |
|---|
| Product | Abortive infection protein |
|---|
| Protein accession | YP_002491996 |
|---|
| Protein GI | 220916692 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1266] Predicted metal-dependent membrane protease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.099393 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGATCCCT CCCGTCCCGG CCCGTCGCAG GGCGACGCGC CCCCGCCCTC GCCGCCCCTT
CCCTCCCCGG CGCCCGCGCC GGAGGCCGGC GAGCCCGGCG GTCCCGCGGC CGCGCCGTTC
CGCAAGAGCG GCCTCGCCTT CTTCGCGGTG CTCCTGCTCC TGTACGGCCC GGGCATCCTG
GCCCAGCAGC TCCACCCGGC GGCGGGCCTG GCCTGGAGCG AGCTCTTCGT GTTCCTGCTG
CCCGCGTTCG CGGCCGCGCT CGGCTCGAAC CTGCGGGCGG TGCCGTACCT CGGCTTGGCG
CGCCCGGCGG GCGTGCCCCT GGCGCTCGCG GCCCTGGCGG GCGCGGCGGG GTTCCTGGTC
GCGAACGCGC TCATGTTCGC GTGGGTGGAG GTGCTCCCCC CGCGCGTCAC CGAGCTGTTC
GACGTGGGCC GGCTGTTCGA GACGCCGGGG CCGCAGCGGT ACGCCATCGC CGCCGCGGCG
GCGCTGCTCG CGCCCGTCTG CGAGGAGGTC GCGTTCCGCG GGTACCTGCA GCGGACGGTC
GCCCTCCGCC GCGGCCCGGC GGCCGGCCTC GCGGCAGGCA CGATCTTCTT CGCGCTCCTG
CACCTCGACC CGGTGCGGCT CCCCGCGCTC CTGCTGCAGG GGCTCCTGTT CGGCTGGCTC
GCGCTGCGCA GCGGCAACAC CTGGAACGCG GTCGCCGCGC ACGCGATGAA CAACGCGCTC
GCGGCGGGGG CCGCGCTCGC CTCCGCCGGC TCGGGCGCGG ACGAGGCCGC CGGCGCGCCC
GCCACCGGGC AGATGGTCGC CACGCTGGTG GCCGGCGGCG TGGCGCTGGC GCTCCTGCTG
CGCGCGTTCC GGAACGCCAC CCCCCCGCCG CCGCCCGCCG CGGCCGCGCT GGAGCGGCGC
GACCCGGCAC AGCCGTCGCT CCGCTTCCGG CTGGCGCGTC TGCCGCAGGG CGTATGGGCG
AGCGCGTCGC TGGGCATGGC GCTGCTCGCG GCGCTCGCGC TCGTGGCCGC GCTGGGCGGC
GGGCGCACCC CTGCGCCGCC GGTGCCCCCC GGTCCGGCCC CCACCGTGCC CGCGCCCTGA
|
|---|
| Protein sequence | MDPSRPGPSQ GDAPPPSPPL PSPAPAPEAG EPGGPAAAPF RKSGLAFFAV LLLLYGPGIL
AQQLHPAAGL AWSELFVFLL PAFAAALGSN LRAVPYLGLA RPAGVPLALA ALAGAAGFLV
ANALMFAWVE VLPPRVTELF DVGRLFETPG PQRYAIAAAA ALLAPVCEEV AFRGYLQRTV
ALRRGPAAGL AAGTIFFALL HLDPVRLPAL LLQGLLFGWL ALRSGNTWNA VAAHAMNNAL
AAGAALASAG SGADEAAGAP ATGQMVATLV AGGVALALLL RAFRNATPPP PPAAAALERR
DPAQPSLRFR LARLPQGVWA SASLGMALLA ALALVAALGG GRTPAPPVPP GPAPTVPAP
|
|---|
| |