Gene A2cp1_1404 details

Gene Information

• Locus tag: A2cp1_1404
• ID: 7299925
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Anaeromyxobacter dehalogenans 2CP-1
• Kingdom: Bacteria
• Replicon accession: NC_011891
• Strand: +
• Start bp: 1570289
• End bp: 1570945
• Gene Length: 657 bp
• Protein Length: 218 aa
• Translation table: 11
• GC content: 70%
• IMG OID: 643594199
• Product: SNARE associated Golgi protein
• Protein accession: YP_002491814
• Protein GI: 220916510
• COG category: [S] Function unknown
• COG ID: [COG0586] Uncharacterized membrane-associated protein

Plasmid Coverage information

• Num covering plasmid clones: 22
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATCTCCA AGGTGATCGA GGCGCTGGCG GTGTTCACCA CGTCGGTGAT CTCGTCGATG 
GGCTACGGCG GCATCGTGCT GCTGATGGCC ATCGAGAGCG CGTGCATCCC GCTGCCCTCC 
GAGATCATCA TGCCGTTCGC CGGGTACCTC GTGTACCGGG GCGAGATGAC GCTGCACGGC 
GCGGCGCTGG CCGGCGCCAT CGGCTGCGTG GTCGGCTCCA TCCCGGCCTA CTACCTGGGC 
CAGTTCGGCG GCCGGCCGCT CATCGAGAAG TACGGCCGCT ACGTGCTCCT CTCGCACAAG 
GAGCTCGACC TCGCCGACCG GCTGTTCCAG CGCTGGGGCC AGTGGGTGGT GTTCGCGGGC 
CGGCTGCTCC CGGTGATCCG CACGTTCATC GCGTTCCCCG CCGGCGTGTC GCGCATGCCG 
ATGGGCAAGT TCGTCCTCTA CACGTTCGTG GGCTCGTACC CCTGGTGCTA CGCGCTCGCG 
TGGGTGGGCG AGTGGGCCGG CGAGGCGTGG CACACCGATC CGCGGGTCAA GGCGATCTAC 
CACCGCTTCG AGCTCGTCAT CGTCGTGGCC GGCGTGCTCG CCGTCGCCTG GTTCGTCTGG 
CACAAGGTGA AGGAGGCGCG CCGCGCCCGC GTGCCGGCCG CCGCCGACGA GGGCTGA 

 

Protein sequence

MISKVIEALA VFTTSVISSM GYGGIVLLMA IESACIPLPS EIIMPFAGYL VYRGEMTLHG 
AALAGAIGCV VGSIPAYYLG QFGGRPLIEK YGRYVLLSHK ELDLADRLFQ RWGQWVVFAG 
RLLPVIRTFI AFPAGVSRMP MGKFVLYTFV GSYPWCYALA WVGEWAGEAW HTDPRVKAIY 
HRFELVIVVA GVLAVAWFVW HKVKEARRAR VPAAADEG