| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | A2cp1_1393 |
|---|
| Symbol | |
|---|
| ID | 7299914 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaeromyxobacter dehalogenans 2CP-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011891 |
|---|
| Strand | - |
|---|
| Start bp | 1558962 |
|---|
| End bp | 1560470 |
|---|
| Gene Length | 1509 bp |
|---|
| Protein Length | 502 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 77% |
|---|
| IMG OID | 643594188 |
|---|
| Product | 4-amino-4-deoxy-L-arabinose transferase |
|---|
| Protein accession | YP_002491803 |
|---|
| Protein GI | 220916499 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1807] 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.108456 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCCGAGCC CCGCCGAGCC CGCTCCGTCG CCGCGCGCCG TCCCCTCCCC TCCGCCCGCC
TCGCCCGTCC GCGATCCGCG CCTCGACCGG CTGGCGCTCG CGCTCGGCGC GACCGTCACC
GCCCTGCACG TCGCCTACGG CGGGCTGATC GCGCTCTCGC CGCAGGAGGC CTACTACTGG
ACCTGGAGCC GGCGGCTCGC GCTCTCGTAC TTCGACCACC CGCCGCTCGC CGCCTGGACC
ATCGCGCTCA CCACCGCGCT CGCCGGCGAG GGCGAGCGCG CCATCCGGCT GGCCGCCGCG
CTGCACTCGG TCGTCTTCGC GGTGTTCCTG TGGCTCACGG TGCGGCGCCT GTTCGGCTCG
CGCCCGGCGC TGGTGGCGCT CGCCGCGGCG TTCAGCGTCC CGCTGTTCGG GATGGGGCAG
GTCATCGTCA CGCCCGACGC CCCGCTGCTC TCCGGCTGGG CGATGGCCCT GTACTTCACG
GTGCGCGCGC TCGACTTGGA GCGGCCGCGC TGGCTGCTCG CGGCCGGCGC CGCGGTGGGC
TGGGCGGTGC TGGGCAAGTA CACCGGGTTC CTGCTGCTGC CGCAGATCCT GCTGGTGCTC
GCGCTCGATC CGCGCGGCCG CCGCATGCTC CGCAGCCCCT GGCCGTGGCT GGGCGCGGCG
CTGGCGCTGG CCCTGTTCGC GCCGGTGGTC GCCTGGAACC TCCAGCACCG GATGGCGAGC
TTCGCGTTCC AGACCGCCGA GCGGGTCGAG CGCTCCGGCT TCCGCCCGGT GCTGGTGGGG
CGCTTCCTCG CGCTGCAGGC CGGCCTCGTC ACGCCGATCG TGCTCGTGCT CCTCGTCGAG
GCGGTGGTGA CGGCGGTGCG CCGCCGCCGC GAGGCGGCCT ACCGGATCTG CGCCATCTTC
GCCGCGCCGC TGCTCGTGCT CGCGGCGGTC ATCTCGCCGT TCCACTGGGT GAAGGGCAAC
TGGCTGGCCG CGGCGTACCC GACCGCGCTC GCCGCGGCGG CCGCCCTGGC GGTGGAGCGG
CGCGGCTGGC GCTGGAAGGC GGGCGTCGCC GGGGTGGCGC TGGCGGCGGT CGCGTCGGTG
TACGTGCACC TCGTGCCGCT CTGGCCCGCG CTGCCGTTCC CCGCGCGCGA CGAGGGCTCC
TCGGGCTGGC GGGAGCTGGC CGCGCGGGTG GAGGCGGAGC GCGCGGCGCT CGGGCCCGAC
GCGTTCGTGG CCGGCTGCAA CTACAAGGTG TCCGCCGAGC TCGAGTACTA CCTGCCCGGC
CGTCCGCGCA CCTGGTCGTC GGAGATCACC GGCGAGCACG GGCTGCAGTA CCGCTACTGG
TTCGATCCCG AGGCGCTCCG CGGCCGCTCC GGCGTGCTGG TGCTCGACCG GCGCGAGAAG
CGCACCTGCC TGCGCCGCGC CGAGGCGTGC GCGCCGCTCG AGGCGCTGCC GCCGCTCACG
GTGCGGCGCG GCGGCGACGA GGTGACGACG TTCCAGCTCT GGCGCTGCCG CTGGGCCGGC
CTGCCCTGA
|
|---|
| Protein sequence | MPSPAEPAPS PRAVPSPPPA SPVRDPRLDR LALALGATVT ALHVAYGGLI ALSPQEAYYW
TWSRRLALSY FDHPPLAAWT IALTTALAGE GERAIRLAAA LHSVVFAVFL WLTVRRLFGS
RPALVALAAA FSVPLFGMGQ VIVTPDAPLL SGWAMALYFT VRALDLERPR WLLAAGAAVG
WAVLGKYTGF LLLPQILLVL ALDPRGRRML RSPWPWLGAA LALALFAPVV AWNLQHRMAS
FAFQTAERVE RSGFRPVLVG RFLALQAGLV TPIVLVLLVE AVVTAVRRRR EAAYRICAIF
AAPLLVLAAV ISPFHWVKGN WLAAAYPTAL AAAAALAVER RGWRWKAGVA GVALAAVASV
YVHLVPLWPA LPFPARDEGS SGWRELAARV EAERAALGPD AFVAGCNYKV SAELEYYLPG
RPRTWSSEIT GEHGLQYRYW FDPEALRGRS GVLVLDRREK RTCLRRAEAC APLEALPPLT
VRRGGDEVTT FQLWRCRWAG LP
|
|---|
| |