Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | A2cp1_1166 |
Symbol | |
ID | 7299031 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anaeromyxobacter dehalogenans 2CP-1 |
Kingdom | Bacteria |
Replicon accession | NC_011891 |
Strand | - |
Start bp | 1306401 |
End bp | 1306958 |
Gene Length | 558 bp |
Protein Length | 185 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 643593954 |
Product | isochorismatase hydrolase |
Protein accession | YP_002491577 |
Protein GI | 220916273 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG1335] Amidases related to nicotinamidase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.339892 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTCACGAA CCGTGAAGCT CGACCGCCGC ACCGCCGCCG TGCTCCTCGT GGACGTGCAG GAGCGGCTCG CGCCCGCCAT GCCCGCCGAG GCGCTGGCGC GGGTGATGAA GTACGCGACC GCGCTCGTCG AGGGCGCCAA GGCGCTCGGG GTCCCCGTGC TCGCGACCGA GCAGTATCCC AGAGGTCTCG GCCCGACCCT CCCCGAGCTC GCCCGCCTGC TCCCCTCCCC CGCGCTCGCC AAGGTGCACT TCTCCTGCGG CGCCGACCCC GCCTTCGCCG CCGCGCTCGA GGCCACCGGC CGCCGGCAGG TCGTGATCAC CGGGATGGAG ACGCACGTGT GCGTGTTCCA GACCGCCCGC GACCTCGTGC AGATGGGCTA CGAGGTGCAC GTCTGCGCCG ACGCCGTGTC GAGCCGGACC GAGGAGCACC GCCGGGTCGG CCTCGAGCTG TGCCGCGAGG CCGGCGCGAT CGTCACGACG GCGGAGACCG CGCTGTTCGA CCTCCTCCAC CAGGCCGGGA CCCCCGAGTT CAAGCAGGTG TCCGCCCTGG TGAAGTGA
|
Protein sequence | MSRTVKLDRR TAAVLLVDVQ ERLAPAMPAE ALARVMKYAT ALVEGAKALG VPVLATEQYP RGLGPTLPEL ARLLPSPALA KVHFSCGADP AFAAALEATG RRQVVITGME THVCVFQTAR DLVQMGYEVH VCADAVSSRT EEHRRVGLEL CREAGAIVTT AETALFDLLH QAGTPEFKQV SALVK
|
| |