Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | A2cp1_1143 |
Symbol | |
ID | 7296540 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anaeromyxobacter dehalogenans 2CP-1 |
Kingdom | Bacteria |
Replicon accession | NC_011891 |
Strand | + |
Start bp | 1275050 |
End bp | 1275823 |
Gene Length | 774 bp |
Protein Length | 257 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 643593930 |
Product | P-type conjugative transfer protein VirB9 |
Protein accession | YP_002491554 |
Protein GI | 220916250 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3504] Type IV secretory pathway, VirB9 components |
TIGRFAM ID | [TIGR02781] P-type conjugative transfer protein VirB9 |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGCCGCG TGATCGTTCT CCTTCTCGCC ATCGCCGTGT CCGCCGGAGC CTCCGAAGGC GGGCCGGACC GCCGGATTCG GTACGTGAGC TACGACCCGG ACACCGTCGT CCCCGTGGAC GCGGTGGTCG GCATCGTCAC GCACATCGTC CTCGAGCCCG GCGAGAGCTA CGTGACGCAC GCGTTCGGCG ACGGAAAGGC ATGGGACTTC GCCGCAAAGG CAAACCACTT CTTCCTCAAG GCGGTCGCGA TGAACGCCGA CTCGAACCTG ACCATCGTCA CCGACCGGCG GAGCTACCAC TTCAGTCTCC GGCTCCTCGC GGAACCGAAG GCGGCGCCGA CCTTCGAGAT CGCCTTCCGC TACCCCGATA CCGAAGCGCG GAAACGCCGC GAGGTTGCGC GGCGGGCCGC GGTCGATGAC GGGTTCAAGG GCAACGGCGA GCTGCCGAAT CTGGACTACA CGATGAGCGG CGATCTCGAC CTCTCGCCAG TGAACACGTG GGACGACCGC GAATTCACGT ACTTCAAGTT TCCCGGCCAG CGCGACATCC CGTCCATCTA CACGGTGGAC CTGGACGGCA ACGAGTCGAT CGTGAACCGC CACAGCACGG GACCGTCGAA CGAGATCGTG GTCGTCCACA AGGTCGCCGC CCGCTGGGTG CTCCGGCTCG GCTCGCGCGC GCTCGCCATA TGGAACGACG CGTACGACCC CGGGGGACGA CGGAACGTGA GCCGGACGGC CTCGCCGGAC GTGAACCGCG TGCTCTGGAG GTAG
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Protein sequence | MRRVIVLLLA IAVSAGASEG GPDRRIRYVS YDPDTVVPVD AVVGIVTHIV LEPGESYVTH AFGDGKAWDF AAKANHFFLK AVAMNADSNL TIVTDRRSYH FSLRLLAEPK AAPTFEIAFR YPDTEARKRR EVARRAAVDD GFKGNGELPN LDYTMSGDLD LSPVNTWDDR EFTYFKFPGQ RDIPSIYTVD LDGNESIVNR HSTGPSNEIV VVHKVAARWV LRLGSRALAI WNDAYDPGGR RNVSRTASPD VNRVLWR
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