| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | A2cp1_0904 |
|---|
| Symbol | |
|---|
| ID | 7298574 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaeromyxobacter dehalogenans 2CP-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011891 |
|---|
| Strand | - |
|---|
| Start bp | 1023754 |
|---|
| End bp | 1024659 |
|---|
| Gene Length | 906 bp |
|---|
| Protein Length | 301 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 80% |
|---|
| IMG OID | 643593697 |
|---|
| Product | peptidase S1 and S6 chymotrypsin/Hap |
|---|
| Protein accession | YP_002491322 |
|---|
| Protein GI | 220916018 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.00313384 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGACCGGGC TGCAGGCGCT CTCGCGCGAC GTCGCCGACC TCGTGGCCCG CGCCGCCCCG
GCGGTGGTGG GCGTGGAGCA GGGCGGCGGC CAGGGCTCCG GCGTCGTGAT CGCGCCGGAC
GGCTGGGTGC TCACCAACGC GCACGTCGCG CGCGGACGCG GCCCGGTCCG CGTCCGGCTC
TCCGGCGCGC GGGTGGTGGC GGCGGAGCGC GCCGGCGGCG ACGACCGCAC CGACGTGGCG
GTGCTGCGGG TGGACGCGCG CGACCTCCCC TCCCTGGCGC TCTCCGAGCG GCGACTCTCG
GTCGGAGAGC TGGTGGTGGC CATCGGCAAC CCGCTCGGCT TCGAGCGCTC GGTCACCCTG
GGCGTGGTCT CGGCGCTGCA CCGCAACCTG GCGGCGCCGC GCGGGGCGGT GCTGGAGGGG
CTGGTCCAGA CCGACGCCTC GATCAACCCG GGCAACTCGG GCGGACCGCT GCTCGACGCC
GGCGGCGCGG TGGTCGGGCT CAGCACCGCC ATGCTCCCCT GGGCGCACGG GATCGGCTTC
GCGGTGCCGG CGCACACGGC GGCGTGGGTG GCCTCGGTGC TGATGCGCGA GGGCGAGGTG
CGCCGCCCGT TCCTCGGGAT CGCGGCGCGC GGCGAGGACC TCGACGCGCG CGACGCGGCG
CTCGCCGGCC ACGGGCGCGG CGTGCGGGTG CTCGAGGTGG TCGAGGGATC GCCGGCCGGC
CGCGCCGCCC TCCGGCCGGG CGACCTGCTC GTCGCGGCGA GCGGCAGCCC GGTGCAGACG
CTGGACGACC TGCAGCGCGT GCTGGTGCTG GCCCGGGCGG GCGAGATCGA CCTGGCGGTC
CTGCGCGCCG GCCGCCCGCT CCGGCTCGCC ATCCGGCCCG ACCCGCCGCG CGCCGCCGCG
GCCTGA
|
|---|
| Protein sequence | MTGLQALSRD VADLVARAAP AVVGVEQGGG QGSGVVIAPD GWVLTNAHVA RGRGPVRVRL
SGARVVAAER AGGDDRTDVA VLRVDARDLP SLALSERRLS VGELVVAIGN PLGFERSVTL
GVVSALHRNL AAPRGAVLEG LVQTDASINP GNSGGPLLDA GGAVVGLSTA MLPWAHGIGF
AVPAHTAAWV ASVLMREGEV RRPFLGIAAR GEDLDARDAA LAGHGRGVRV LEVVEGSPAG
RAALRPGDLL VAASGSPVQT LDDLQRVLVL ARAGEIDLAV LRAGRPLRLA IRPDPPRAAA
A
|
|---|
| |