| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | A2cp1_0546 |
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| Symbol | |
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| ID | 7296825 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anaeromyxobacter dehalogenans 2CP-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011891 |
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| Strand | - |
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| Start bp | 623716 |
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| End bp | 626886 |
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| Gene Length | 3171 bp |
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| Protein Length | 1056 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 643593340 |
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| Product | transporter, hydrophobe/amphiphile efflux-1 (HAE1) family |
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| Protein accession | YP_002490969 |
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| Protein GI | 220915665 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family
[TIGR01131] ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes) |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGCCAGGT TCTTCATCGA TAGGCCCATC TTCGCGTGGG TGATCTCGAT CATGATCATG
CTGGCCGGTG GGCTCGCCAT CCTGGGCCTG CCGGTCTCGC AGTACCCCGC CATCGCGCCG
CCGGTCGTCA CGGTGTACGC GACCTACCCG GGCGCGAACG CGCAGACGCT GGAGAACTCG
GTCACCCAGG TCATCGAGCA GAAGATGACC GGCATCGACC ACCTCCGGTA CATGTCCGCC
GCGAGCGACA GCTCCGGCAA CGCGAGCGTC ACGCTCACGT TCGAGGCCGA GGCCGATCCG
GACATCGCGC AGATGCAGGT GCAGAACAAG CTGCAGAACG CCATGCCGCT GCTGCCGCAG
CAGGTGCAGC AGCAGGGCGT GCGCGTCCTG AAGACCGTCA GCAACTACCT GCTCATCGCC
GGCCTCATCT CCGAGGACGG CAGCATGACG CGCGACGACC TGAACGACTA CGCGTTCTCG
AACATCGTCG ACCCGATCAG CCGTGTGACC GGCGTCGGCG AGGTGACCGC GTTCGGCACC
CAGTACGCCA TGCGCATCTG GCTCGACGCC GACAAGCTCG CCAGCTTCAA GCTCACCCCG
CTCGACGTGA GCGGCGCCCT CCGGGCGCAG AACGCGCAGG TGTCCACCGG CTCCCTCGGC
GCGGCCCCGG CCGTGCCCGG CCAGCAGCTC AACGCCACGG TCACCTCGCA GACCCGGCTC
CAGACGCCCG AGCAGTTCCT GAACATCCTC CTGCGCGTCA ACCCCGACGG CTCGCAGGTG
CGGCTGCGCG ACGTCGGCAC CGCGAACCTG GGCGGCGAGA CCTACGAGCT CGAGAGCTAC
TACAACGGCA AGCCCGCCGG CGGCATGGGC ATCCGGCTCG CCTCGGGCGC GAACGCGCTG
AAGACCGCCG ACCTGGTGCG CGCCAAGCTC ACCGAGCTGT CGCAGTACTT CCCGCCGGGG
ATGAAGGTCG TCTATCCGGT CGATTCCACG CCGTTCGTGC GGATCTCGAT CGAGGAGGTG
GTGAAGACCC TCGCCGAGGC CATCATCCTC GTGTTCCTGG TGATGTTCCT GTTCCTGCAG
AACTTCCGCG CCACGCTCAT CCCGACCATC GCGGTGCCGG TGGTGCTGCT CGGCACGTTC
GGCGTGCTGG CGGCGGCCGG CTTCACCGTG AACACGCTGA CCATGCTGGG CCTGGTGCTC
GCCATCGGGC TGCTGGTGGA CGACGCCATC GTGGTGGTCG AGAACGTCGA GCGCGTGATG
AGCGAGGAGG GGCTCTCGCC GCGCGAGGCC ACCCGCAAGT CGATGGGCCA GATCACCGGC
GCGCTCGTCG GCATCGCGCT GGTGCTCGCC GCGGTGTTCG TCCCCATGGC GTTCTTCGGC
GGCTCGGTGG GCGTCATCTA CCGGCAGTTC TCCATCACCG TGGTCTCGGC CATGGCGCTG
TCGGTGGTGG TCGCGCTGAC GCTCACGCCC GCGCTGTGCG CCACGATCCT GAAGCCCGTC
GAGAAGGGGC ACCACGCCTC GGAGAAGGGG TTCTTCGGCT GGTTCAACCG GCTCTACGGG
CAGGGCAGCG GGATCTACGA GAAGTCGGTG GGCTGGATCC TGCGCCGCGC CGGTCGCGCC
CTGATCGTCT ACGCCGTGCT GCTCGCGGCG CTGGGCGGGC TGTTCCTGCA CCTGCCCACC
GGCTTCCTCC CGGAGGAGGA CCAGGGCTCC ATCATCAACA TGGTGCAGCT GCCCGCCGGC
GCCACCATGG ACCGGACCCG CACGGTGATG CAGGAGGTGA CGCGGCACTA CCTCGAGGAC
GAGAAGGACA ACGTCGAGGC GGTGATGGCC ATCACCGGCT TCAGCTTCTC CGGCCGCGGC
CAGAACGCCG GCCTCGCGTT CGTGCGCCTG AAGGACTGGT CCGAGCGCCC GAAGAAGGAG
CAGCACGCGC CCGCCATCGC CGGGCGCGCC ATGCGGGCGT TCTCGCAGAT CAAGGACGGC
CTCGCGTTCG CGTTCGTGCC GCCGGCGGTG CCCGAGCTCG GCAACGCCAC CGGCTTCGAG
CTGCAGCTCC AGGACCGCGG CAACCTCGGC CACGAGGCGC TCATGGCGGC CCGCAACCAG
CTCCTCGGCA TGGCCGCGCA GGATCCGCGC CTCGCCAAGG TCCGCCCGCT CGGCCTGGAG
GACACGCCGC AGTACCGCAT CGACGTGGAC CAGCAGAAGG CCGCGGCCCT CGGGCTCTCG
CTCTCCGACA TCAACGCCAC CCTGTCCAGC ACCTGGGGCG TCAACTACGT CGACGACTTC
GTGGACAAGG GGCGCACCAA GCGCGTGTAC GTGCAGGCCG CCGCGCCGTT CCGCATGAAG
CCGGAGGACC TGAACCGCTG GTACGTGCGC AACGCCGCCG GGCAGATGGT CCCGTTCTCG
GCGTTCTCCA CCGGCACCTG GGTGCACGGC CCCACCAAGC TCGAGCGCTT CAACGGCTCC
CCGGCCATGG TGATCCAGGG CGAGCCGTCC CCGGGCCACA GCTCGGGCGA GGCCATGGCC
GCCATGGAGG AGCACGTCAA GGCGCTCCCG GCCGGCATCG GCCTGGAGTG GTCGGGCCTC
TCGTACGAGG AGCGGCTCTC GGGCGCGAAC GCCCCGGCGC TCTACACCAT CTCGCTGCTG
GTGGTGTTCC TCGCGCTGGC GGCGCTCTAC GAGAGCTGGT CCATCCCGTT CTCGGTGATG
CTGGTGGTGC CGCTCGGCGT GCTCGGCGCG GTGCTGTTCA CCGAGCTCGC GAGCATGGAC
GCCGGCGTCT ACTTTCAGGT CGGCCTGCTC ACCACCATCG GCCTCTCCGC CAAGAACGCC
ATCCTCATCG TCGAGTTCGC GAGGGCCCTG TACGAGCAGG GCATGAGCCT GTTCGACGCC
GCCGTGGAGG CGGCCCGCAT GCGCCTCCGC CCCATCATCA TGACCTCGCT CGCCTTCATC
CTCGGCGTGC TCCCGCTCGC GATCGCGAAC GGGGCCGGCG CGGCCGGGCA GAACGCCATC
GGCGTGGCGG TGATCGGCGG CATGGTCTCG GCCACCTTCC TCGCCATCCT GCTCGTGCCG
GTGTTCTTCG TGAAGATCGC CGGCAAGCGG AAGACGCCGC CGCCCGACCT GGTGGCCGGA
CCGCGCGACG ACGAGGACGA GGCCGCGCCG AAGGAGATCG CCCATGCGTA G
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| Protein sequence | MARFFIDRPI FAWVISIMIM LAGGLAILGL PVSQYPAIAP PVVTVYATYP GANAQTLENS
VTQVIEQKMT GIDHLRYMSA ASDSSGNASV TLTFEAEADP DIAQMQVQNK LQNAMPLLPQ
QVQQQGVRVL KTVSNYLLIA GLISEDGSMT RDDLNDYAFS NIVDPISRVT GVGEVTAFGT
QYAMRIWLDA DKLASFKLTP LDVSGALRAQ NAQVSTGSLG AAPAVPGQQL NATVTSQTRL
QTPEQFLNIL LRVNPDGSQV RLRDVGTANL GGETYELESY YNGKPAGGMG IRLASGANAL
KTADLVRAKL TELSQYFPPG MKVVYPVDST PFVRISIEEV VKTLAEAIIL VFLVMFLFLQ
NFRATLIPTI AVPVVLLGTF GVLAAAGFTV NTLTMLGLVL AIGLLVDDAI VVVENVERVM
SEEGLSPREA TRKSMGQITG ALVGIALVLA AVFVPMAFFG GSVGVIYRQF SITVVSAMAL
SVVVALTLTP ALCATILKPV EKGHHASEKG FFGWFNRLYG QGSGIYEKSV GWILRRAGRA
LIVYAVLLAA LGGLFLHLPT GFLPEEDQGS IINMVQLPAG ATMDRTRTVM QEVTRHYLED
EKDNVEAVMA ITGFSFSGRG QNAGLAFVRL KDWSERPKKE QHAPAIAGRA MRAFSQIKDG
LAFAFVPPAV PELGNATGFE LQLQDRGNLG HEALMAARNQ LLGMAAQDPR LAKVRPLGLE
DTPQYRIDVD QQKAAALGLS LSDINATLSS TWGVNYVDDF VDKGRTKRVY VQAAAPFRMK
PEDLNRWYVR NAAGQMVPFS AFSTGTWVHG PTKLERFNGS PAMVIQGEPS PGHSSGEAMA
AMEEHVKALP AGIGLEWSGL SYEERLSGAN APALYTISLL VVFLALAALY ESWSIPFSVM
LVVPLGVLGA VLFTELASMD AGVYFQVGLL TTIGLSAKNA ILIVEFARAL YEQGMSLFDA
AVEAARMRLR PIIMTSLAFI LGVLPLAIAN GAGAAGQNAI GVAVIGGMVS ATFLAILLVP
VFFVKIAGKR KTPPPDLVAG PRDDEDEAAP KEIAHA
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