Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | A2cp1_0525 |
Symbol | |
ID | 7296804 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anaeromyxobacter dehalogenans 2CP-1 |
Kingdom | Bacteria |
Replicon accession | NC_011891 |
Strand | - |
Start bp | 604417 |
End bp | 604836 |
Gene Length | 420 bp |
Protein Length | 139 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 643593319 |
Product | nickel responsive regulator |
Protein accession | YP_002490948 |
Protein GI | 220915644 |
COG category | [K] Transcription |
COG ID | [COG0864] Predicted transcriptional regulators containing the CopG/Arc/MetJ DNA-binding domain and a metal-binding domain |
TIGRFAM ID | [TIGR02793] nickel-responsive transcriptional regulator NikR |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.317174 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCTGGAGC GCATCGGGAT CTCGCTCGAG GACGGGCTGC TCGAGCAGTT CGACAAGCTC ATCGCCGAGA AGGGCTACGT CAACCGCTCG GAGGCGATCC GCGATCTCAT CCGCGACGCG CTGGTGCAGC GCGCGTTCAC CGAGTCCTCG GGGCGCGAGG AGCGCGTGGC GGTGGTGACG CTGGTCTACG ACCACGACTC GTCCAGCCTG GCGCAGAAGC TCGCGCACAT CCAGCACGAG AACCACCGGG CGGTGGTCTC GGCCCTGCAC GTCCACATGG ACCCGCACAA CTGCCTCGAG GTGCTGGTGC TCCGCGGGCG GGGCAAGGAC GTGGTCGCGA TGGGCGAGAG CCTGGTCGCG ACCAGGGGCG TGAAGTACGG CAAGCTCGTG CCGGCCACCG CCGGGCACGA CCTCGGCTGA
|
Protein sequence | MLERIGISLE DGLLEQFDKL IAEKGYVNRS EAIRDLIRDA LVQRAFTESS GREERVAVVT LVYDHDSSSL AQKLAHIQHE NHRAVVSALH VHMDPHNCLE VLVLRGRGKD VVAMGESLVA TRGVKYGKLV PATAGHDLG
|
| |