| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | A2cp1_0383 |
|---|
| Symbol | |
|---|
| ID | 7296486 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaeromyxobacter dehalogenans 2CP-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011891 |
|---|
| Strand | - |
|---|
| Start bp | 427780 |
|---|
| End bp | 428664 |
|---|
| Gene Length | 885 bp |
|---|
| Protein Length | 294 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 643593176 |
|---|
| Product | RNA polymerase, sigma-24 subunit, ECF subfamily |
|---|
| Protein accession | YP_002490806 |
|---|
| Protein GI | 220915502 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
|---|
| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCGACG GAACGGAGAC CTTCGAGACG CAACGTCCGG CCCTGCTCGC GCTCGCCTAC
CGGATGCTCG GGGAGCTGGC GCGCGCCGAG GACGTGGTGC AGGAGGCGTG GCTCCGGTGG
CAGCGGCGCC CGGACGAGGT CGGCTCCGCG AAGGCGTTCC TGCTCACCAC CGTCGCGCGC
CTCTGCCTCG ACGAGCTCGG CTCGGCGCGG GCGAGGCGGG AGGAGAGCCG CAGCGATCGG
CTGCCGGAGC CGGTGGACCT CGAGCGCGCG GGCCTCGGGC GCGTGGAGAT GCTCGACCGG
ATCTCGATGG CGTTCCTGGT CCTCCTGCAG CGCCTCACGC CCGCCGAGCG CGCCGTGCTG
CTGCTGCACG ACGTGTTCGA CATGACCCAC GCCGAGATCG CGGCGCGGCT CGAGAGGAGC
GAGCCGGCGT GCCGGCAGCT CCTCAGGCGG GCGAGGGAGA ACGTCGCGAC GGAGCGCCGC
ACGCTCCGGG CGTCGCGCGA CGAGCACCGC CGGCTCCTGG CGGCGTTCAT GGAGGCGAGC
GCGCGTGGTG ACCAGCGCGC GCTGCTCGAG CTGCTCGCGG AGGACGCCGT CCTCATCGCC
GACGCGGGTC CGGGCGTGGT GCGCTACGGA CGCATCCGCA ACATCGGACG GCCGGTGGTC
GGCGGCGTGA AGGTGGCCGC GCTGCTCGCG TCCGTGGCGC GGCAGCGGGT CGGGGCGCCG
CTCGAGCTGC GCGAGCGCAC GCTCAACGGG GAGCCGGCCG CGGTGGCGTT CGAGGACGGG
CGTCCGGTGT CGGCCATCGT GCTCGCGGTC GCCGGCGGCA AGGTACGGCA CGTGTATCTC
CAGGTGGACC CGGAGCGGCT CCGCCACGTC GGTCCGCTGG CGTGA
|
|---|
| Protein sequence | MTDGTETFET QRPALLALAY RMLGELARAE DVVQEAWLRW QRRPDEVGSA KAFLLTTVAR
LCLDELGSAR ARREESRSDR LPEPVDLERA GLGRVEMLDR ISMAFLVLLQ RLTPAERAVL
LLHDVFDMTH AEIAARLERS EPACRQLLRR ARENVATERR TLRASRDEHR RLLAAFMEAS
ARGDQRALLE LLAEDAVLIA DAGPGVVRYG RIRNIGRPVV GGVKVAALLA SVARQRVGAP
LELRERTLNG EPAAVAFEDG RPVSAIVLAV AGGKVRHVYL QVDPERLRHV GPLA
|
|---|
| |