Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | A2cp1_0281 |
Symbol | |
ID | 7298983 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anaeromyxobacter dehalogenans 2CP-1 |
Kingdom | Bacteria |
Replicon accession | NC_011891 |
Strand | + |
Start bp | 315182 |
End bp | 316831 |
Gene Length | 1650 bp |
Protein Length | 549 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 643593076 |
Product | methylmalonyl-CoA mutase, large subunit |
Protein accession | YP_002490706 |
Protein GI | 220915402 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1884] Methylmalonyl-CoA mutase, N-terminal domain/subunit |
TIGRFAM ID | [TIGR00641] methylmalonyl-CoA mutase N-terminal domain |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0034305 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCGGACG AGAAGAAGCA GCGGTGGCTC GAGGGCACCT ACGCGAAGGC GGTGAAGAAG GGGCCCGAGC GGCGCCCGCG CTTCGAGACG AGCAGCGGCA TCCGCGAGGA GCCGGTGTAC GGCGCGGCCG ACGTGCGCCC CGGCCTCGAC GAGCGGCTGG GCCTGCCCGG CGAGTACCCG TTCACCCGCG GCGTGCAGCC CACCATGTAC CGCGGCCGCT TCTGGACCAT GCGGCAGTAC GCCGGGTTCG GCACCGCCGA GGAGTCGAAC AAGCGCTACC GCTACCTGCT CGAGTCCGGC CAGACCGGCC TCTCGGTCGC GTTCGACCTG CCCACGCAGA TGGGCCGCGA CTCCGACCAC CCCCGCGCCC GCGGCGAGGT GGGCAAGGTG GGCGTGGCCA TCGACTCGAT CCGCGACATG GAGGTGCTGT TCGACCGGAT CCCGCTCGGC GAGGTCTCCA CCTCGATGAC CATCAACGCG ACCGCCGGGA TGCTGCTCGC GATGTACCAG GCGGTGGGCG AGAAGCAGGG GGCCGCGCCG GCGGTGCTGC AGGGCACCAT CCAGAACGAC ATCCTGAAGG AGTACGCGGC GCGCGGGACG TACATCTACC CGCCGGAGCC GTCGCTGCGG ATCATCACCG ACATCTTCGC CTACACCGCG AAGGTGATGC CGCGCTGGAA CCCCATCTCC ATCTCCGGCT ACCACATCCG CGAGGCCGGC TCGACCGCGG TGCAGGAGGT GGCCTTCACG CTCGCCGACG GCATCCAGTA CGTGGACGCG GCGGTGAAGG CGGGCCTCGA CGTGGACGCG TTCGCGGGCC GGCTCTCCTT CTTCTTCAAC GCGCACAACG ACCTGCTGGA GGAGGTGGCG AAGTTCCGCG CCGCGCGCCG GCTCTGGGCG CGCATCATGA AGGAGCGGTT CAAGGCGAAG GACCCGCGCT CGATGATGCT GCGGTTCCAC ACCCAGACCG CCGGCTCCAT GCTCACCGCG CAGCAGCCGG ACAACAACAT CGTGCGCGTC ACCCTCCAGG CGCTGGCGGC GGTGCTGGGC GGCACGCAGT CGCTGCACAC CAACTCGCGC GACGAGGCGC TCGGGCTGCC CACCGAGGAC TCGGTGCGCA TCGCGCTCCG CACGCAGCAG ATCATCGCGA ACGAGTCGGG CGTCGCCGAC GTCATCGACC CGCTCGGCGG CAGCTGGGCC ATCGAGGCCA TGACCGACGA GATCGAGGGG CGCGCCCAGG AGTACATCCG GAAGATCGAC GAGCTGGGCG GCATGGTCCA CGCGATCTCG AAGGGCTACG TGCAGCGCGA GATCCAGGAG GCCGCCTACG CCTGGCAGCG CCAGGTCGAG GCGAAGGACC AGGTGGTCGT CGGCGTGAAC GCGTTCAGGT CGGACGATCC GCCGGTGCCG GTGATGAAGG TCGATCCGGC GCTGGAGGCG CAGCAGGTGG AGCGGCTGAA GGCGCTCCGC GCCGCCCGCA GCGCCTCGGC CGCGCGCGGC GCGCTCGACG CGGTGCGGGC CGGCGCCCGC GGGACCGACA ACCTCATGCC GCTCATCCTC GCCGCCGTGA AGGCCGAGTG CACGCTCGGG GAGATCTCCG ACGCGCTGCG CGAGGTCTAC GGCGAGTACC GGGAGACGGT GGTACTCTAG
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Protein sequence | MADEKKQRWL EGTYAKAVKK GPERRPRFET SSGIREEPVY GAADVRPGLD ERLGLPGEYP FTRGVQPTMY RGRFWTMRQY AGFGTAEESN KRYRYLLESG QTGLSVAFDL PTQMGRDSDH PRARGEVGKV GVAIDSIRDM EVLFDRIPLG EVSTSMTINA TAGMLLAMYQ AVGEKQGAAP AVLQGTIQND ILKEYAARGT YIYPPEPSLR IITDIFAYTA KVMPRWNPIS ISGYHIREAG STAVQEVAFT LADGIQYVDA AVKAGLDVDA FAGRLSFFFN AHNDLLEEVA KFRAARRLWA RIMKERFKAK DPRSMMLRFH TQTAGSMLTA QQPDNNIVRV TLQALAAVLG GTQSLHTNSR DEALGLPTED SVRIALRTQQ IIANESGVAD VIDPLGGSWA IEAMTDEIEG RAQEYIRKID ELGGMVHAIS KGYVQREIQE AAYAWQRQVE AKDQVVVGVN AFRSDDPPVP VMKVDPALEA QQVERLKALR AARSASAARG ALDAVRAGAR GTDNLMPLIL AAVKAECTLG EISDALREVY GEYRETVVL
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